Back to Multiple platform build/check report for BioC 3.11
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

BUILD report for proteoQC on machv2

This page was generated on 2020-10-17 11:59:17 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE proteoQC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1370/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
proteoQC 1.24.0
Bo Wen
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/proteoQC
Branch: RELEASE_3_11
Last Commit: 5cce0ed
Last Changed Date: 2020-04-27 14:40:51 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK [ ERROR ] skipped  skipped 

Summary

Package: proteoQC
Version: 1.24.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data proteoQC
StartedAt: 2020-10-16 20:37:20 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 20:37:52 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 32.5 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data proteoQC
###
##############################################################################
##############################################################################


* checking for file ‘proteoQC/DESCRIPTION’ ... OK
* preparing ‘proteoQC’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘proteoQC.Rmd’ using rmarkdown
Warning: Package 'proteoQC' is deprecated and will be removed from Bioconductor
  version 3.12
Quitting from lines 57-60 (proteoQC.Rmd) 
Error: processing vignette 'proteoQC.Rmd' failed with diagnostics:
Server denied you to change to the given directory
--- failed re-building ‘proteoQC.Rmd’

SUMMARY: processing the following file failed:
  ‘proteoQC.Rmd’

Error: Vignette re-building failed.
Execution halted