Hiroaki Kato
| Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020) |
| URL: https://git.bioconductor.org/packages/nuCpos |
| Branch: master |
| Last Commit: 5a41f48 |
| Last Changed Date: 2019-11-07 22:21:50 -0500 (Thu, 07 Nov 2019) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-01-16 13:52:00 -0500 (Thu, 16 Jan 2020).
| Package 1164/1818 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| nuCpos 1.5.1 Hiroaki Kato
| malbec2 | Linux (Ubuntu 18.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: nuCpos |
| Version: 1.5.1 |
| Command: rm -rf nuCpos.buildbin-libdir && mkdir nuCpos.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh nuCpos_1.5.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R nuCpos.buildbin-libdir |
| StartedAt: 2020-01-16 11:25:11 -0500 (Thu, 16 Jan 2020) |
| EndedAt: 2020-01-16 11:25:26 -0500 (Thu, 16 Jan 2020) |
| EllapsedTime: 15.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: nuCpos_1.5.1.tgz |
| PackageFileSize: 1.23 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf nuCpos.buildbin-libdir && mkdir nuCpos.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh nuCpos_1.5.1.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R nuCpos.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=nuCpos.buildbin-libdir nuCpos_1.5.1.tar.gz' >>>>>>> * installing *source* package ‘nuCpos’ ... ** using staged installation ** libs gfortran -fPIC -Wall -g -O2 -c HBA_3.f90 -o HBA_3.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c R_init_nuCpos.c -o R_init_nuCpos.o gfortran -fPIC -Wall -g -O2 -c localHBA_3.f90 -o localHBA_3.o gfortran -fPIC -Wall -g -O2 -c nuCpos2_1.f90 -o nuCpos2_1.o gfortran -fPIC -Wall -g -O2 -c nuCpos2_2.f90 -o nuCpos2_2.o gfortran -fPIC -Wall -g -O2 -c nuCpos_1.f90 -o nuCpos_1.o gfortran -fPIC -Wall -g -O2 -c nuCpos_2.f90 -o nuCpos_2.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o nuCpos.so HBA_3.o R_init_nuCpos.o localHBA_3.o nuCpos2_1.o nuCpos2_2.o nuCpos_1.o nuCpos_2.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.11-bioc/meat/nuCpos.buildbin-libdir/00LOCK-nuCpos/00new/nuCpos/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nuCpos) >>>>>>> >>>>>>> FIXING LINKS FOR nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libgcc_s.1.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libgfortran.3.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libreadline.5.2.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libreadline.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libquadmath.0.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/gfortran/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libgfortran.3.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so" install_name_tool -change "/usr/local/gfortran/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libquadmath.0.dylib" "nuCpos.buildbin-libdir/nuCpos/libs//nuCpos.so"