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BUILD BIN report for ncGTW on tokay2

This page was generated on 2020-10-17 11:57:15 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE ncGTW PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1177/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ncGTW 1.2.0
Chiung-Ting Wu
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/ncGTW
Branch: RELEASE_3_11
Last Commit: 83d4c3d
Last Changed Date: 2020-04-27 15:28:50 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ncGTW
Version: 1.2.0
Command: rm -rf ncGTW.buildbin-libdir && mkdir ncGTW.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ncGTW.buildbin-libdir ncGTW_1.2.0.tar.gz
StartedAt: 2020-10-17 11:08:00 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:09:27 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 87.0 seconds
RetCode: 0
Status:  OK  
PackageFile: ncGTW_1.2.0.zip
PackageFileSize: 2.084 MiB

Command output

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### Running command:
###
###   rm -rf ncGTW.buildbin-libdir && mkdir ncGTW.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ncGTW.buildbin-libdir ncGTW_1.2.0.tar.gz
###
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install for i386

* installing *source* package 'ncGTW' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c graphCut.cpp -o graphCut.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c ibfs.cpp -o ibfs.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o ncGTW.dll tmp.def RcppExports.o graphCut.o ibfs.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/ncGTW.buildbin-libdir/00LOCK-ncGTW/00new/ncGTW/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ncGTW'
    finding HTML links ... done
    adjustRT                                html  
    compCV                                  html  
    fillPeaksChromPar                       html  
    getPeaksncGTW                           html  
    loadProfile                             html  
    meanCorOl                               html  
    misalignDetect                          html  
    ncGTW-package                           html  
    ncGTWalign                              html  
    ncGTWinput-accessors                    html  
    ncGTWinput-class                        html  
    ncGTWoutput-accessors                   html  
    ncGTWoutput-class                       html  
    ncGTWparam-class                        html  
    ncGTWwarp-accessors                     html  
    ncGTWwarp-class                         html  
    plotGroup                               html  
    xcmsExamples                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ncGTW' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c graphCut.cpp -o graphCut.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c ibfs.cpp -o ibfs.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o ncGTW.dll tmp.def RcppExports.o graphCut.o ibfs.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/ncGTW.buildbin-libdir/ncGTW/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ncGTW' as ncGTW_1.2.0.zip
* DONE (ncGTW)