Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:05 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE microRNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1079/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
microRNA 1.46.0 "James F. Reid"
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: microRNA |
Version: 1.46.0 |
Command: rm -rf microRNA.buildbin-libdir && mkdir microRNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microRNA.buildbin-libdir microRNA_1.46.0.tar.gz |
StartedAt: 2020-10-17 11:01:46 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 11:02:22 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 35.9 seconds |
RetCode: 0 |
Status: OK |
PackageFile: microRNA_1.46.0.zip |
PackageFileSize: 5.911 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf microRNA.buildbin-libdir && mkdir microRNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=microRNA.buildbin-libdir microRNA_1.46.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'microRNA' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function 'SEXPREC* longest_common_substring(SEXP)': longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare] if (i == len[index] - 1) { // ignore null termination character ~~^~~~~~~~~~~~~~~~~ C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o microRNA.dll tmp.def longest_common_substring.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/microRNA.buildbin-libdir/00LOCK-microRNA/00new/microRNA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'microRNA' finding HTML links ... done RNA2DNA html get_selfhyb_subseq html hsSeqs html hsTargets html matchSeeds html mmSeqs html mmTargets html s3utr html seedRegions html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'microRNA' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function 'SEXPREC* longest_common_substring(SEXP)': longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare] if (i == len[index] - 1) { // ignore null termination character ~~^~~~~~~~~~~~~~~~~ C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o microRNA.dll tmp.def longest_common_substring.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/microRNA.buildbin-libdir/microRNA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'microRNA' as microRNA_1.46.0.zip * DONE (microRNA)