Vivek Bhardwaj
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/icetea |
| Branch: RELEASE_3_11 |
| Last Commit: 618e6b3 |
| Last Changed Date: 2020-10-13 07:43:21 -0400 (Tue, 13 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:51 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE icetea PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 848/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| icetea 1.6.1 Vivek Bhardwaj
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: icetea |
| Version: 1.6.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/icetea_1.6.1.tar.gz && rm -rf icetea.buildbin-libdir && mkdir icetea.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=icetea.buildbin-libdir icetea_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL icetea_1.6.1.zip && rm icetea_1.6.1.tar.gz icetea_1.6.1.zip |
| StartedAt: 2020-10-16 19:26:34 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:28:30 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 116.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/icetea_1.6.1.tar.gz && rm -rf icetea.buildbin-libdir && mkdir icetea.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=icetea.buildbin-libdir icetea_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL icetea_1.6.1.zip && rm icetea_1.6.1.tar.gz icetea_1.6.1.zip
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install for i386
* installing *source* package 'icetea' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'icetea'
finding HTML links ... done
ResizeReads html
activeChrs html
annotateTSS html
check_capSet html
demultiplexFASTQ html
detectDiffTSS html
finding level-2 HTML links ... done
detectTSS html
diffQCplots html
exampleCSobject html
exportTSS html
filterDuplicates html
filterDups html
fitDiffTSS html
getBamFlags html
getChromBins html
getChromWindows html
getGeneCounts html
getMCparams html
getNormFactors html
get_newfastq html
getranks html
mapCaps html
newCapSet html
numReadsInBed html
plotPrecision html
plotReadStats html
plotTSSprecision html
sampleInfo html
splitBAM_byIndex html
splitBAM_byRepindex html
split_fastq html
splitranks html
strandBinCounts html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'icetea' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'icetea' as icetea_1.6.1.zip
* DONE (icetea)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'icetea' successfully unpacked and MD5 sums checked