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INSTALL report for gwascat on tokay2

This page was generated on 2020-10-17 11:56:48 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE gwascat PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 796/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gwascat 2.20.1
VJ Carey
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/gwascat
Branch: RELEASE_3_11
Last Commit: 97258a1
Last Changed Date: 2020-05-02 10:36:06 -0400 (Sat, 02 May 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: gwascat
Version: 2.20.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/gwascat_2.20.1.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.20.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL gwascat_2.20.1.zip && rm gwascat_2.20.1.tar.gz gwascat_2.20.1.zip
StartedAt: 2020-10-16 19:25:38 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:28:27 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 169.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/gwascat_2.20.1.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.20.1.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL gwascat_2.20.1.zip && rm gwascat_2.20.1.tar.gz gwascat_2.20.1.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2 43.9M    2  912k    0     0  2689k      0  0:00:16 --:--:--  0:00:16 2738k
100 43.9M  100 43.9M    0     0  38.0M      0  0:00:01  0:00:01 --:--:-- 38.2M

install for i386

* installing *source* package 'gwascat' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gwascat'
    finding HTML links ... done
    bindcadd_snv                            html  
    chklocs                                 html  
    ebicat37                                html  
    ebicat37UCSC                            html  
    ebicat_b37                              html  
    ebicat_b38                              html  
    gwascat-package                         html  
    gwastagger                              html  
    gwaswloc-class                          html  
    gwcex2gviz                              html  
    gwdf_2012_02_02                         html  
    ldtagr                                  html  
    locon6                                  html  
    locs4trait                              html  
    makeCurrentGwascat                      html  
    obo2graphNEL                            html  
    riskyAlleleCount                        html  
    si.hs.37                                html  
    topTraits                               html  
    traitsManh                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gwascat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gwascat' as gwascat_2.20.1.zip
* DONE (gwascat)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'gwascat' successfully unpacked and MD5 sums checked