Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:54:45 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE flowPeaks PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 619/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
flowPeaks 1.34.0 Yongchao Ge
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: flowPeaks |
Version: 1.34.0 |
Command: /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL flowPeaks |
StartedAt: 2020-10-16 16:03:17 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 16:03:34 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 17.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD INSTALL flowPeaks ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.11-bioc/R/library’ * installing *source* package ‘flowPeaks’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c Rpack.cpp -o Rpack.o Rpack.cpp: In function ‘void Rpack_relevel(int*, int*, int*, int*, int*, int*)’: Rpack.cpp:141:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(levels.size()<(i+1)){ ~~~~~~~~~~~~~^~~~~~ g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c Rregistrate.cpp -o Rregistrate.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c VoronoiDiagramGenerator.cpp -o VoronoiDiagramGenerator.o VoronoiDiagramGenerator.cpp: In member function ‘void VoronoiDiagramGenerator::out_site(Site*)’: VoronoiDiagramGenerator.cpp:803:5: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses] if(!triangulate & plot & !debug) ^~~~~~~~~~~~ g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c flowPeaks.cpp -o flowPeaks.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c func_collect.cpp -o func_collect.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c func_collect_supp.cpp -o func_collect_supp.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c gvector_gmatrix.cpp -o gvector_gmatrix.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c kd_tree.cpp -o kd_tree.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.11-bioc/R/include" -DNDEBUG -I/usr/local/include `gsl-config --cflags` -fpic -g -O2 -Wall -c kmns.cpp -o kmns.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.11-bioc/R/lib -L/usr/local/lib -o flowPeaks.so Rpack.o Rregistrate.o VoronoiDiagramGenerator.o flowPeaks.o func_collect.o func_collect_supp.o gvector_gmatrix.o kd_tree.o kmns.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/biocbuild/bbs-3.11-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.11-bioc/R/library/00LOCK-flowPeaks/00new/flowPeaks/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flowPeaks)