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INSTALL report for flowDensity on tokay2

This page was generated on 2020-10-17 11:56:35 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE flowDensity PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 612/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowDensity 1.22.0
Mehrnoush Malek
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/flowDensity
Branch: RELEASE_3_11
Last Commit: e9c887a
Last Changed Date: 2020-04-27 14:41:18 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: flowDensity
Version: 1.22.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/flowDensity_1.22.0.tar.gz && rm -rf flowDensity.buildbin-libdir && mkdir flowDensity.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowDensity.buildbin-libdir flowDensity_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL flowDensity_1.22.0.zip && rm flowDensity_1.22.0.tar.gz flowDensity_1.22.0.zip
StartedAt: 2020-10-16 18:19:32 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:20:27 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 54.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/flowDensity_1.22.0.tar.gz && rm -rf flowDensity.buildbin-libdir && mkdir flowDensity.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowDensity.buildbin-libdir flowDensity_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL flowDensity_1.22.0.zip && rm flowDensity_1.22.0.tar.gz flowDensity_1.22.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 4398k  100 4398k    0     0  46.0M      0 --:--:-- --:--:-- --:--:-- 49.3M

install for i386

* installing *source* package 'flowDensity' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** help
Warning: bad markup (extra space?) at plotDens.Rd:62:19
*** installing help indices
  converting help for package 'flowDensity'
    finding HTML links ... done
    CellPopulation-class                    html  
    deGate                                  html  
    flowDensity-methods                     html  
    flowDensity                             html  
    getPeaks                                html  
    getflowFrame                            html  
    nmRemove                                html  
    notSubFrame                             html  
    plotDens                                html  
** building package indices
** installing vignettes
   'flowDensity.Rmd' 
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'flowDensity' ...
** testing if installed package can be loaded
Warning: replacing previous import 'flowCore::plot' by 'graphics::plot' when loading 'flowDensity'
* MD5 sums
packaged installation of 'flowDensity' as flowDensity_1.22.0.zip
* DONE (flowDensity)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'flowDensity' successfully unpacked and MD5 sums checked