Loyal A. Goff
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/cummeRbund |
| Branch: RELEASE_3_11 |
| Last Commit: 612a5cf |
| Last Changed Date: 2020-04-27 14:27:10 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:24 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE cummeRbund PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 406/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| cummeRbund 2.30.0 Loyal A. Goff
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: cummeRbund |
| Version: 2.30.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/cummeRbund_2.30.0.tar.gz && rm -rf cummeRbund.buildbin-libdir && mkdir cummeRbund.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cummeRbund.buildbin-libdir cummeRbund_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL cummeRbund_2.30.0.zip && rm cummeRbund_2.30.0.tar.gz cummeRbund_2.30.0.zip |
| StartedAt: 2020-10-16 19:33:36 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:36:20 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 164.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/cummeRbund_2.30.0.tar.gz && rm -rf cummeRbund.buildbin-libdir && mkdir cummeRbund.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=cummeRbund.buildbin-libdir cummeRbund_2.30.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL cummeRbund_2.30.0.zip && rm cummeRbund_2.30.0.tar.gz cummeRbund_2.30.0.zip
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install for i386
* installing *source* package 'cummeRbund' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'cummeRbund'
finding HTML links ... done
CuffData-class html
CuffDist-class html
CuffFeature-class html
CuffFeatureSet-class html
CuffGene-class html
CuffGeneSet-class html
CuffSet-class html
JSdist html
JSdistFromP html
JSdistVec html
MAplot html
PINK1 html
QCplots html
addFeatures html
count html
countMatrix html
csBoxplot html
csCluster html
csClusterPlot html
csDendro html
csDensity html
csDistHeat html
csHeatmap html
csScatter html
csSpecificity html
csVolcano html
cummeRbund-package html
diffData html
dimensionality html
dispersionPlot html
distValues html
exploratory html
expressionBarplot html
expressionPlot html
featureNames html
features html
findGene html
findSimilar html
fpkm html
fpkmMatrix html
getFeatures html
getGene html
getGeneId html
getGenes html
getLevels html
getRepLevels html
getSig html
getSigTable html
makeprobs html
makeprobsvec html
readCufflinks html
repFpkm html
replicates html
runInfo html
sampleGeneSet html
sampleIDs html
samples html
shannon.entropy html
sigMatrix html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'cummeRbund' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cummeRbund' as cummeRbund_2.30.0.zip
* DONE (cummeRbund)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'cummeRbund' successfully unpacked and MD5 sums checked