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BUILD report for cogena on celaya2

This page was generated on 2020-01-16 13:42:04 -0500 (Thu, 16 Jan 2020).

Package 337/1818HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cogena 1.21.0
Zhilong Jia
Snapshot Date: 2020-01-15 16:46:30 -0500 (Wed, 15 Jan 2020)
URL: https://git.bioconductor.org/packages/cogena
Branch: master
Last Commit: 96cefa9
Last Changed Date: 2019-10-29 13:39:16 -0500 (Tue, 29 Oct 2019)
malbec2 Linux (Ubuntu 18.04.3 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK [ OK ] WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: cogena
Version: 1.21.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data cogena
StartedAt: 2020-01-15 22:02:43 -0500 (Wed, 15 Jan 2020)
EndedAt: 2020-01-15 22:07:50 -0500 (Wed, 15 Jan 2020)
EllapsedTime: 306.9 seconds
RetCode: 0
Status:  OK 
PackageFile: cogena_1.21.0.tar.gz
PackageFileSize: 5.827 MiB

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data cogena
###
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* checking for file ‘cogena/DESCRIPTION’ ... OK
* preparing ‘cogena’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/PD_data_af3d6d27c5ee409d8c9efa6ff85bb39e.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/PD_data_af3d6d27c5ee409d8c9efa6ff85bb39e.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/cogena_84a51ba54f1a76fb9b703968204df539.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/cogena_84a51ba54f1a76fb9b703968204df539.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/cogena_result_analysis_e83b185932bcd841cafed1ff49d07fb7.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/cogena_result_analysis_e83b185932bcd841cafed1ff49d07fb7.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/corInCluster_1822bfd8289546f14c750b4726aba719.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/corInCluster_1822bfd8289546f14c750b4726aba719.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_ec3c1276ffe71bc466499784f21589fe.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_ec3c1276ffe71bc466499784f21589fe.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_figure2_a92333bf1cf2a40ef50a7fbaa8aad70f.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_figure2_a92333bf1cf2a40ef50a7fbaa8aad70f.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_figure_d7a533cdddb1a9738722f7bf39dd7d9d.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/drp_figure_d7a533cdddb1a9738722f7bf39dd7d9d.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/enrichment_4390a4ce09914a0b156dafc7efb6de31.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/enrichment_4390a4ce09914a0b156dafc7efb6de31.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/geneExpInCluster_e9efef62e28ce50441471c9cb333a7ce.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/geneExpInCluster_e9efef62e28ce50441471c9cb333a7ce.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/geneInCluster_b0b41c041dd76f99547c0cda2868a382.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/geneInCluster_b0b41c041dd76f99547c0cda2868a382.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/gene_list_annotation_7034dc496794777ba01cd2abf9db0955.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/gene_list_annotation_7034dc496794777ba01cd2abf9db0955.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapCluster_2d5d2a55f172b290d1d8c1a4e237c52d.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapCluster_2d5d2a55f172b290d1d8c1a4e237c52d.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapPEI_B_01f59adf3745f82adddf0030ebfba8ac.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapPEI_B_01f59adf3745f82adddf0030ebfba8ac.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapPEI_d948fedede7e687a3b5a1ca76a5bafbe.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/heatmapPEI_d948fedede7e687a3b5a1ca76a5bafbe.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/import_data_3b5a98e9b7b1c8c215620604ea34784c.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/import_data_3b5a98e9b7b1c8c215620604ea34784c.rdx’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/sessionInfo_2bc0882f2b6baf0637f5dbf13159914b.RData’  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  ‘tmp/sessionInfo_2bc0882f2b6baf0637f5dbf13159914b.rdx’
* building ‘cogena_1.21.0.tar.gz’