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INSTALL report for clonotypeR on tokay2

This page was generated on 2020-10-17 11:56:18 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE clonotypeR PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 312/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clonotypeR 1.26.0
Charles Plessy
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/clonotypeR
Branch: RELEASE_3_11
Last Commit: 634cd21
Last Changed Date: 2020-04-27 14:34:34 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: clonotypeR
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/clonotypeR_1.26.0.tar.gz && rm -rf clonotypeR.buildbin-libdir && mkdir clonotypeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clonotypeR.buildbin-libdir clonotypeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL clonotypeR_1.26.0.zip && rm clonotypeR_1.26.0.tar.gz clonotypeR_1.26.0.zip
StartedAt: 2020-10-16 17:09:05 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:09:29 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 24.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/clonotypeR_1.26.0.tar.gz && rm -rf clonotypeR.buildbin-libdir && mkdir clonotypeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clonotypeR.buildbin-libdir clonotypeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL clonotypeR_1.26.0.zip && rm clonotypeR_1.26.0.tar.gz clonotypeR_1.26.0.zip
###
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100  104k  100  104k    0     0  1454k      0 --:--:-- --:--:-- --:--:-- 1630k

install for i386

* installing *source* package 'clonotypeR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clonotypeR'
    finding HTML links ... done
    clonotypeR                              html  
    clonotype_table                         html  
    clonotyper_extdata                      html  
    common_clonotypes                       html  
    is_unproductive                         html  
    private_clonotypes                      html  
    read_clonotypes                         html  
    unique_clonotypes                       html  
    yassai_identifier                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'clonotypeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clonotypeR' as clonotypeR_1.26.0.zip
* DONE (clonotypeR)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'clonotypeR' successfully unpacked and MD5 sums checked