Paolo Martini
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/clipper |
| Branch: RELEASE_3_11 |
| Last Commit: 4179105 |
| Last Changed Date: 2020-04-27 14:32:50 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:18 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE clipper PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 308/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| clipper 1.28.0 Paolo Martini
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: clipper |
| Version: 1.28.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/clipper_1.28.0.tar.gz && rm -rf clipper.buildbin-libdir && mkdir clipper.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clipper.buildbin-libdir clipper_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL clipper_1.28.0.zip && rm clipper_1.28.0.tar.gz clipper_1.28.0.zip |
| StartedAt: 2020-10-16 19:21:12 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:23:00 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 108.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/clipper_1.28.0.tar.gz && rm -rf clipper.buildbin-libdir && mkdir clipper.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clipper.buildbin-libdir clipper_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL clipper_1.28.0.zip && rm clipper_1.28.0.tar.gz clipper_1.28.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 418k 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 418k 100 418k 0 0 6628k 0 --:--:-- --:--:-- --:--:-- 6968k
install for i386
* installing *source* package 'clipper' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
** help
*** installing help indices
converting help for package 'clipper'
finding HTML links ... done
clipper html
clipperAllRoots html
cliqueMeanTest html
cliqueMixedTest html
cliquePairedTest html
cliqueVarianceTest html
deleteEdge html
easyClip html
easyLook html
getGraphEntryGenes html
getJunctionTreePaths html
nameCliques html
pathwayTest html
plotInCytoscape html
prunePaths html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
** testing if installed package can be loaded from final location
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'clipper' ...
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
* MD5 sums
packaged installation of 'clipper' as clipper_1.28.0.zip
* DONE (clipper)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'clipper' successfully unpacked and MD5 sums checked