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INSTALL report for bigmelon on tokay2

This page was generated on 2020-10-17 11:56:08 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE bigmelon PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 145/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bigmelon 1.14.0
Tyler J. Gorrie-Stone
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/bigmelon
Branch: RELEASE_3_11
Last Commit: bf9812a
Last Changed Date: 2020-04-27 15:01:54 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: bigmelon
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/bigmelon_1.14.0.tar.gz && rm -rf bigmelon.buildbin-libdir && mkdir bigmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bigmelon.buildbin-libdir bigmelon_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL bigmelon_1.14.0.zip && rm bigmelon_1.14.0.tar.gz bigmelon_1.14.0.zip
StartedAt: 2020-10-16 19:17:50 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 19:20:21 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 151.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/bigmelon_1.14.0.tar.gz && rm -rf bigmelon.buildbin-libdir && mkdir bigmelon.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bigmelon.buildbin-libdir bigmelon_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL bigmelon_1.14.0.zip && rm bigmelon_1.14.0.tar.gz bigmelon_1.14.0.zip
###
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100  681k  100  681k    0     0  9956k      0 --:--:-- --:--:-- --:--:-- 10.7M

install for i386

* installing *source* package 'bigmelon' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
Creating a new generic function for 'fot' in package 'bigmelon'
Creating a new generic function for 'predictSex' in package 'bigmelon'
** help
*** installing help indices
  converting help for package 'bigmelon'
    finding HTML links ... done
    GEOtoGDS                                html  
    app2gds                                 html  
    backupGdsn                              html  
    bigmelon-accessors                      html  
    bigmelon-internal                       html  
    bigmelon-normalization                  html  
    finding level-2 HTML links ... done

    bigmelon-package                        html  
    bumphunterGdsn                          html  
    cantaloupe                              html  
    combogds                                html  
    ecc                                     html  
    es2gds                                  html  
    finalreport2gds                         html  
    gds2mlumi                               html  
    getquantilesandranks                    html  
    iadd                                    html  
    pfiltergds                              html  
    prcompgdsn                              html  
    pwodgdsn                                html  
    rankednorm                              html  
    redirect                                html  
    wm-port                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'bigmelon' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'lumi'
* MD5 sums
packaged installation of 'bigmelon' as bigmelon_1.14.0.zip
* DONE (bigmelon)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'bigmelon' successfully unpacked and MD5 sums checked