Jack Fu
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/ballgown |
| Branch: RELEASE_3_11 |
| Last Commit: e3e54c6 |
| Last Changed Date: 2020-04-27 14:41:54 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:07 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE ballgown PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 108/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ballgown 2.20.0 Jack Fu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: ballgown |
| Version: 2.20.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ballgown_2.20.0.tar.gz && rm -rf ballgown.buildbin-libdir && mkdir ballgown.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ballgown.buildbin-libdir ballgown_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ballgown_2.20.0.zip && rm ballgown_2.20.0.tar.gz ballgown_2.20.0.zip |
| StartedAt: 2020-10-16 19:01:03 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:03:21 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 138.6 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ballgown_2.20.0.tar.gz && rm -rf ballgown.buildbin-libdir && mkdir ballgown.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ballgown.buildbin-libdir ballgown_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ballgown_2.20.0.zip && rm ballgown_2.20.0.tar.gz ballgown_2.20.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 3216k 100 3216k 0 0 31.6M 0 --:--:-- --:--:-- --:--:-- 33.7M
install for i386
* installing *source* package 'ballgown' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'structure' in package 'ballgown'
** help
*** installing help indices
converting help for package 'ballgown'
finding HTML links ... done
annotate_assembly html
ballgown-class html
ballgown-constructor html
ballgown-package html
ballgownrsem html
bg html
checkAssembledTx html
clusterTranscripts html
collapseTranscripts html
contains html
dirs html
eexpr html
expr-replace html
expr html
exprfilter html
geneIDs html
geneNames html
getAttributeField html
getGenes html
gexpr html
gffRead html
gffReadGR html
iexpr html
indexes-replace html
indexes html
last html
mergedDate html
pData-replace html
pData html
pctOverlap html
plotLatentTranscripts html
plotMeans html
plotTranscripts html
sampleNames html
seqnames html
stattest html
structure html
subset html
tGene html
texpr html
transcriptIDs html
transcriptNames html
writeFiles html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ballgown' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ballgown' as ballgown_2.20.0.zip
* DONE (ballgown)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'ballgown' successfully unpacked and MD5 sums checked