'Raik Otto'
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/Uniquorn |
| Branch: RELEASE_3_11 |
| Last Commit: 22e7622 |
| Last Changed Date: 2020-04-27 14:55:14 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:58 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE Uniquorn PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1859/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Uniquorn 2.8.0 'Raik Otto'
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: Uniquorn |
| Version: 2.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Uniquorn_2.8.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.8.0.zip && rm Uniquorn_2.8.0.tar.gz Uniquorn_2.8.0.zip |
| StartedAt: 2020-10-16 19:16:08 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:17:54 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 105.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Uniquorn_2.8.0.tar.gz && rm -rf Uniquorn.buildbin-libdir && mkdir Uniquorn.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Uniquorn.buildbin-libdir Uniquorn_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Uniquorn_2.8.0.zip && rm Uniquorn_2.8.0.tar.gz Uniquorn_2.8.0.zip
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install for i386
* installing *source* package 'Uniquorn' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Uniquorn'
finding HTML links ... done
add_custom_vcf_to_database html
add_missing_cls html
add_p_q_values_statistics html
add_penalty_statistics html
create_bed_file html
identify_vcf_file html
init_and_load_identification html
initiate_canonical_databases html
match_query_ccl_to_database html
parse_ccle_genotype_data html
parse_cosmic_genotype_data html
parse_vcf_file html
parse_vcf_query_into_db html
read_library_names html
read_mutation_grange_objects html
remove_ccls_from_database html
remove_library_from_database html
show_contained_ccls html
show_contained_variants_for_ccl html
show_contained_variants_in_library html
show_which_ccls_contain_variant html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Uniquorn' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Uniquorn' as Uniquorn_2.8.0.zip
* DONE (Uniquorn)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Uniquorn' successfully unpacked and MD5 sums checked