Manuela Hummel
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/TEQC |
| Branch: RELEASE_3_11 |
| Last Commit: 2f2cec4 |
| Last Changed Date: 2020-04-27 14:23:52 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:55 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE TEQC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1790/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| TEQC 4.10.0 Manuela Hummel
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped |
| Package: TEQC |
| Version: 4.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TEQC_4.10.0.tar.gz && rm -rf TEQC.buildbin-libdir && mkdir TEQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TEQC.buildbin-libdir TEQC_4.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TEQC_4.10.0.zip && rm TEQC_4.10.0.tar.gz TEQC_4.10.0.zip |
| StartedAt: 2020-10-16 18:31:27 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:32:07 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 39.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/TEQC_4.10.0.tar.gz && rm -rf TEQC.buildbin-libdir && mkdir TEQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TEQC.buildbin-libdir TEQC_4.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL TEQC_4.10.0.zip && rm TEQC_4.10.0.tar.gz TEQC_4.10.0.zip
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install for i386
* installing *source* package 'TEQC' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'TEQC'
finding HTML links ... done
TEQCreport html
chrom.barplot html
coverage.GC html
coverage.correlation html
coverage.density html
coverage.hist html
coverage.plot html
coverage.target html
coverage.targetlength.plot html
coverage.uniformity html
covered.k html
duplicates.barplot html
fraction.reads.target html
fraction.target html
get.baits html
get.reads html
get.targets html
insert.size.hist html
make.wigfiles html
multiTEQCreport html
reads2pairs html
readsPerTarget html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'TEQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TEQC' as TEQC_4.10.0.zip
* DONE (TEQC)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'TEQC' successfully unpacked and MD5 sums checked