Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:52 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE SSPA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1735/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
SSPA 2.28.0 Maarten van Iterson
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | NA | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK |
Package: SSPA |
Version: 2.28.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SSPA_2.28.0.tar.gz && rm -rf SSPA.buildbin-libdir && mkdir SSPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SSPA.buildbin-libdir SSPA_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SSPA_2.28.0.zip && rm SSPA_2.28.0.tar.gz SSPA_2.28.0.zip |
StartedAt: 2020-10-16 17:19:29 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 17:20:31 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 62.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SSPA_2.28.0.tar.gz && rm -rf SSPA.buildbin-libdir && mkdir SSPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SSPA.buildbin-libdir SSPA_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SSPA_2.28.0.zip && rm SSPA_2.28.0.tar.gz SSPA_2.28.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 390k 100 390k 0 0 6037k 0 --:--:-- --:--:-- --:--:-- 6734k install for i386 * installing *source* package 'SSPA' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c SSPA_init.c -o SSPA_init.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c massdistc.c -o massdistc.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c nncgc.c -o nncgc.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def SSPA_init.o massdistc.o nncgc.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/SSPA.buildbin-libdir/00LOCK-SSPA/00new/SSPA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SSPA' finding HTML links ... done Nutrigenomics html cornerLcurve html cornerScurve html dbitri html deconvolution html deepSAGE html defineEffectSizeRange html findroot html midpoint html nncg html pbitri html picardplot html pilotData html predictpower html qbitri html rbitri html regularization html sampleSize html show-methods html simdat html simpson html standardform html tikhonov html trapezoidal html trimbin html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SSPA' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c SSPA_init.c -o SSPA_init.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c massdistc.c -o massdistc.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c nncgc.c -o nncgc.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o SSPA.dll tmp.def SSPA_init.o massdistc.o nncgc.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/SSPA.buildbin-libdir/SSPA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'SSPA' as SSPA_2.28.0.zip * DONE (SSPA) * installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library' package 'SSPA' successfully unpacked and MD5 sums checked