Jack Zhu
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/SRAdb |
| Branch: RELEASE_3_11 |
| Last Commit: fc16df9 |
| Last Changed Date: 2020-04-27 14:21:57 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:51 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE SRAdb PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1727/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SRAdb 1.50.0 Jack Zhu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | NA | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: SRAdb |
| Version: 1.50.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SRAdb_1.50.0.tar.gz && rm -rf SRAdb.buildbin-libdir && mkdir SRAdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SRAdb.buildbin-libdir SRAdb_1.50.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SRAdb_1.50.0.zip && rm SRAdb_1.50.0.tar.gz SRAdb_1.50.0.zip |
| StartedAt: 2020-10-16 17:58:55 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:59:28 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 33.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SRAdb_1.50.0.tar.gz && rm -rf SRAdb.buildbin-libdir && mkdir SRAdb.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SRAdb.buildbin-libdir SRAdb_1.50.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SRAdb_1.50.0.zip && rm SRAdb_1.50.0.tar.gz SRAdb_1.50.0.zip
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install for i386
* installing *source* package 'SRAdb' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SRAdb'
finding HTML links ... done
IGVclear html
IGVcollapse html
IGVgenome html
IGVgoto html
IGVload html
IGVsession html
IGVsnapshot html
IGVsocket html
IGVsort html
SRAdb-package html
ascpR html
ascpSRA html
colDescriptions html
entityGraph html
getFASTQfile html
getFASTQinfo html
getSRA html
getSRAdbFile html
getSRAfile html
getSRAinfo html
listSRAfile html
sraConvert html
sraGraph html
startIGV html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SRAdb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SRAdb' as SRAdb_1.50.0.zip
* DONE (SRAdb)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'SRAdb' successfully unpacked and MD5 sums checked