| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:40 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE Roleswitch PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1523/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Roleswitch 1.26.0 Yue Li
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK |
| Package: Roleswitch |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Roleswitch_1.26.0.tar.gz && rm -rf Roleswitch.buildbin-libdir && mkdir Roleswitch.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Roleswitch.buildbin-libdir Roleswitch_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Roleswitch_1.26.0.zip && rm Roleswitch_1.26.0.tar.gz Roleswitch_1.26.0.zip |
| StartedAt: 2020-10-16 17:43:05 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:43:55 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 49.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Roleswitch_1.26.0.tar.gz && rm -rf Roleswitch.buildbin-libdir && mkdir Roleswitch.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Roleswitch.buildbin-libdir Roleswitch_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Roleswitch_1.26.0.zip && rm Roleswitch_1.26.0.tar.gz Roleswitch_1.26.0.zip
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install for i386
* installing *source* package 'Roleswitch' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Roleswitch'
finding HTML links ... done
Roleswitch-package html
diagnosticPlot html
getSeedMatrix html
roleswitch html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0u5TLT/R.INSTALL17b873f475d2/Roleswitch/man/roleswitch.Rd:42: file link 'eSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0u5TLT/R.INSTALL17b873f475d2/Roleswitch/man/roleswitch.Rd:42: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0u5TLT/R.INSTALL17b873f475d2/Roleswitch/man/roleswitch.Rd:45: file link 'eSet' in package 'Biobase' does not exist and so has been treated as a topic
tcga_gbm_testdata html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Roleswitch' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Roleswitch' as Roleswitch_1.26.0.zip
* DONE (Roleswitch)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Roleswitch' successfully unpacked and MD5 sums checked