Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:33 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE RBioinf PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1422/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
RBioinf 1.48.0 Robert Gentleman
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: RBioinf |
Version: 1.48.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RBioinf_1.48.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.48.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.48.0.zip && rm RBioinf_1.48.0.tar.gz RBioinf_1.48.0.zip |
StartedAt: 2020-10-16 17:53:34 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 17:55:23 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 108.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/RBioinf_1.48.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.48.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.48.0.zip && rm RBioinf_1.48.0.tar.gz RBioinf_1.48.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 3430k 100 3430k 0 0 16.3M 0 --:--:-- --:--:-- --:--:-- 16.9M install for i386 * installing *source* package 'RBioinf' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rand.c -o rand.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/RBioinf.buildbin-libdir/00LOCK-RBioinf/00new/RBioinf/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RBioinf' finding HTML links ... done Rcal html S4Help html asSimpleVector html classList2Graph html computeClassLinearization html printWithNumbers html randDNA html simplePVect html simpleRand html simpleSort html subClassNames html superClasses html traceMethods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RBioinf' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rand.c -o rand.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/RBioinf.buildbin-libdir/RBioinf/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'RBioinf' as RBioinf_1.48.0.zip * DONE (RBioinf) * installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library' package 'RBioinf' successfully unpacked and MD5 sums checked