This page was generated on 2020-10-17 11:59:17 -0400 (Sat, 17 Oct 2020).
PSICQUIC 1.26.1 Paul Shannon
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
URL: https://git.bioconductor.org/packages/PSICQUIC |
Branch: RELEASE_3_11 |
Last Commit: f5fb002 |
Last Changed Date: 2020-05-26 13:36:09 -0400 (Tue, 26 May 2020) |
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | |
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | [ ERROR ] | skipped | skipped | |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data PSICQUIC
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* checking for file ‘PSICQUIC/DESCRIPTION’ ... OK
* preparing ‘PSICQUIC’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘PSICQUIC.Rnw’ using Sweave
Loading required package: IRanges
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which, which.max, which.min
Loading required package: S4Vectors
Loading required package: stats4
Attaching package: ‘S4Vectors’
The following object is masked from ‘package:base’:
expand.grid
Loading required package: biomaRt
Loading required package: httr
Loading required package: plyr
Attaching package: ‘plyr’
The following object is masked from ‘package:IRanges’:
desc
The following object is masked from ‘package:S4Vectors’:
rename
Warning: replacing previous import ‘IRanges::desc’ by ‘plyr::desc’ when loading ‘PSICQUIC’
checking for biomart access...
does 'http://www.ensembl.org' respond?
Error: processing vignette 'PSICQUIC.Rnw' failed with diagnostics:
chunk 8 (label = addGeneNames)
Error in IDMapper("9606") : url.exists(url) is not TRUE
--- failed re-building ‘PSICQUIC.Rnw’
SUMMARY: processing the following file failed:
‘PSICQUIC.Rnw’
Error: Vignette re-building failed.
Execution halted