Ying Hu
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/OmicCircos |
| Branch: RELEASE_3_11 |
| Last Commit: 26f103d |
| Last Changed Date: 2020-04-27 14:35:19 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:18 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE OmicCircos PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1221/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| OmicCircos 1.26.0 Ying Hu
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: OmicCircos |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/OmicCircos_1.26.0.tar.gz && rm -rf OmicCircos.buildbin-libdir && mkdir OmicCircos.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OmicCircos.buildbin-libdir OmicCircos_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL OmicCircos_1.26.0.zip && rm OmicCircos_1.26.0.tar.gz OmicCircos_1.26.0.zip |
| StartedAt: 2020-10-16 17:56:57 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:58:05 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 67.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/OmicCircos_1.26.0.tar.gz && rm -rf OmicCircos.buildbin-libdir && mkdir OmicCircos.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OmicCircos.buildbin-libdir OmicCircos_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL OmicCircos_1.26.0.zip && rm OmicCircos_1.26.0.tar.gz OmicCircos_1.26.0.zip
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install for i386
* installing *source* package 'OmicCircos' ...
** using staged installation
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'OmicCircos'
finding HTML links ... done
OmicCircos html
TCGA.BC.cnv.2k.60 html
TCGA.BC.fus html
TCGA.BC.gene.exp.2k.60 html
TCGA.BC.sample60 html
TCGA.BC_Her2_cnv_exp html
TCGA.PAM50_genefu_hg18 html
UCSC.chr.colors html
UCSC.hg18 html
UCSC.hg18.chr html
UCSC.hg19 html
UCSC.hg19.chr html
UCSC.mm10 html
UCSC.mm10.chr html
UCSC.mm9 html
UCSC.mm9.chr html
circos html
segAnglePo-methods html
segAnglePo html
sim.circos html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'OmicCircos' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OmicCircos' as OmicCircos_1.26.0.zip
* DONE (OmicCircos)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'OmicCircos' successfully unpacked and MD5 sums checked