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BUILD BIN report for MinimumDistance on tokay2

This page was generated on 2020-10-17 11:57:06 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE MinimumDistance PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1086/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MinimumDistance 1.32.0
Robert B Scharpf
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/MinimumDistance
Branch: RELEASE_3_11
Last Commit: a9633d0
Last Changed Date: 2020-04-27 14:29:35 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: MinimumDistance
Version: 1.32.0
Command: rm -rf MinimumDistance.buildbin-libdir && mkdir MinimumDistance.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MinimumDistance.buildbin-libdir MinimumDistance_1.32.0.tar.gz
StartedAt: 2020-10-17 11:02:14 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:03:41 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 87.2 seconds
RetCode: 0
Status:  OK  
PackageFile: MinimumDistance_1.32.0.zip
PackageFileSize: 3.631 MiB

Command output

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### Running command:
###
###   rm -rf MinimumDistance.buildbin-libdir && mkdir MinimumDistance.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MinimumDistance.buildbin-libdir MinimumDistance_1.32.0.tar.gz
###
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install for i386

* installing *source* package 'MinimumDistance' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
Creating a new generic function for 'allNames' in package 'MinimumDistance'
in method for 'coerce' with signature '"RangedDataCNV","GRanges"': no definition for class "RangedDataCNV"
Creating a generic function for 'colMads' from package 'matrixStats' in package 'MinimumDistance'
in method for 'prune' with signature 'object="TrioSet",ranges="RangedDataCNV"': no definition for class "RangedDataCNV"
in method for 'prune' with signature 'object="TrioSetList",ranges="RangedDataCNV"': no definition for class "RangedDataCNV"
** help
*** installing help indices
  converting help for package 'MinimumDistance'
    finding HTML links ... done
    DNAcopyParam                            html  
    Defunct                                 html  
    Deprecated                              html  
    FilterParamMD-class                     html  
    FilterParamMD                           html  
    MAP                                     html  
    MAP2                                    html  
    MDRanges-class                          html  
    MinDistExperiment-class                 html  
    MinDistExperiment                       html  
    MinDistGRanges-class                    html  
    MinDistGRanges                          html  
    MinDistParam-class                      html  
    MinDistParam                            html  
    MinDistPosterior-class                  html  
    MinimumDistance                         html  
    ParentOffspring-class                   html  
    ParentOffspringList-class               html  
    Pedigree-class                          html  
    Pedigree                                html  
    PennParam                               html  
    TrioSet-class                           html  
    TrioSet                                 html  
    TrioSetList-class                       html  
    TrioSetList                             html  
    TrioSetListLD                           html  
    acf2                                    html  
    calculateMindist                        html  
    coercion-methods                        html  
    denovo                                  html  
    exampleTrioSetList                      html  
    filterExperiment                        html  
    mad2                                    html  
    mdLegend                                html  
    md_exp                                  html  
    md_gr                                   html  
    mindist                                 html  
    nMAD                                    html  
    pedigreeGrid                            html  
    pedigreeName                            html  
    pedigreeViewports                       html  
    plotDenovo                              html  
    range-ILimit-method                     html  
    segment2                                html  
    finding level-2 HTML links ... done

** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
** testing if installed package can be loaded from final location
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MinimumDistance' ...
** testing if installed package can be loaded
No methods found in package 'oligoClasses' for request: 'mean' when loading 'crlmm'
* MD5 sums
packaged installation of 'MinimumDistance' as MinimumDistance_1.32.0.zip
* DONE (MinimumDistance)