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BUILD BIN report for MSnID on tokay2

This page was generated on 2020-10-17 11:57:13 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE MSnID PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1142/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSnID 1.22.0
Vlad Petyuk
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/MSnID
Branch: RELEASE_3_11
Last Commit: 56cf547
Last Changed Date: 2020-04-27 14:43:17 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: MSnID
Version: 1.22.0
Command: rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.22.0.tar.gz
StartedAt: 2020-10-17 11:05:44 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:06:49 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 64.5 seconds
RetCode: 0
Status:  OK  
PackageFile: MSnID_1.22.0.zip
PackageFileSize: 3.579 MiB

Command output

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### Running command:
###
###   rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.22.0.tar.gz
###
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install for i386

* installing *source* package 'MSnID' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSnID'
    finding HTML links ... done
    MSnID-class                             html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/MSnID-class.Rd:65: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/MSnID-class.Rd:81: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/MSnID-class.Rd:102: file link 'proteins' in package 'MSnID' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/MSnID-class.Rd:188: file link 'MSnSet' in package 'MSnbase' does not exist and so has been treated as a topic
    MSnID-package                           html  
    MSnIDFilter-class                       html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/MSnIDFilter-class.Rd:86: file link 'MSnSet' in package 'MSnbase' does not exist and so has been treated as a topic
    accessions                              html  
    apply_filter                            html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/apply_filter.Rd:20: file link 'MSnIDFilter' in package 'MSnID' does not exist and so has been treated as a topic
    assess_missed_cleavages                 html  
    assess_termini                          html  
    correct_peak_selection                  html  
    data                                    html  
    evaluate_filter                         html  
    id_quality                              html  
    infer_parsimonious_accessions           html  
    mass_measurement_error                  html  
    optimize_filter                         html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/optimize_filter.Rd:48: file link 'mclapply' in package 'parallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/optimize_filter.Rd:67: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
    peptides                                html  
    psms                                    html  
    read_mzIDs                              html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/read_mzIDs.Rd:11: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp8oTiSM/R.INSTALLed4660067b1/MSnID/man/read_mzIDs.Rd:27: missing file link 'mzR-package'
    recalibrate                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MSnID' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSnID' as MSnID_1.22.0.zip
* DONE (MSnID)