Guillem Rigaill
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/ITALICS |
| Branch: RELEASE_3_11 |
| Last Commit: 7bf7334 |
| Last Changed Date: 2020-04-27 14:17:41 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:55 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE ITALICS PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 905/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ITALICS 2.48.0 Guillem Rigaill
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: ITALICS |
| Version: 2.48.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ITALICS_2.48.0.tar.gz && rm -rf ITALICS.buildbin-libdir && mkdir ITALICS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ITALICS.buildbin-libdir ITALICS_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ITALICS_2.48.0.zip && rm ITALICS_2.48.0.tar.gz ITALICS_2.48.0.zip |
| StartedAt: 2020-10-16 18:00:19 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:01:21 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 62.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/ITALICS_2.48.0.tar.gz && rm -rf ITALICS.buildbin-libdir && mkdir ITALICS.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ITALICS.buildbin-libdir ITALICS_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL ITALICS_2.48.0.zip && rm ITALICS_2.48.0.tar.gz ITALICS_2.48.0.zip
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install for i386
* installing *source* package 'ITALICS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
** help
*** installing help indices
converting help for package 'ITALICS'
finding HTML links ... done
GLAD.GLAD html
ITALICSNew html
ITALICSTrain html
Model.GetConfDat html
Model.GetCorrection html
Model.GetEffet html
Model.GetModel html
Model.GetResidu html
New.AddInfo html
New.fromQuartetToSnp html
New.fromSnpToQuartet html
New.getQuartet html
New.getSnpInfo html
New.readQuartetCopyNb html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
** testing if installed package can be loaded from final location
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ITALICS' ...
** testing if installed package can be loaded
No methods found in package 'RSQLite' for request: 'dbListFields' when loading 'oligo'
* MD5 sums
packaged installation of 'ITALICS' as ITALICS_2.48.0.zip
* DONE (ITALICS)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'ITALICS' successfully unpacked and MD5 sums checked