Nicolas Servant
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/HiTC |
| Branch: RELEASE_3_11 |
| Last Commit: 763e1c7 |
| Last Changed Date: 2020-04-27 14:29:28 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:49 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE HiTC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 827/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| HiTC 1.32.0 Nicolas Servant
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: HiTC |
| Version: 1.32.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/HiTC_1.32.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL HiTC_1.32.0.zip && rm HiTC_1.32.0.tar.gz HiTC_1.32.0.zip |
| StartedAt: 2020-10-16 18:41:01 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:42:08 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 67.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/HiTC_1.32.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.32.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL HiTC_1.32.0.zip && rm HiTC_1.32.0.tar.gz HiTC_1.32.0.zip
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install for i386
* installing *source* package 'HiTC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HiTC'
finding HTML links ... done
CQC html
HTCexp-class html
HTClist-class html
HiTC-internal html
Nora_5C html
binningC html
directionalityIndex html
discretize html
export.my5C html
exportC html
extractRegion html
getAnnotatedRestrictionSites html
getExpectedCounts html
getPearsonMap html
getRestrictionFragmentsPerChromosome html
import.my5C html
importC html
intervalsDist html
mapC html
normICE html
normLGF html
pca.hic html
removeIntervals html
setGenomicFeatures html
setIntervalScale html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'HiTC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HiTC' as HiTC_1.32.0.zip
* DONE (HiTC)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'HiTC' successfully unpacked and MD5 sums checked