Shian Su
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/Glimma |
| Branch: RELEASE_3_11 |
| Last Commit: f54795c |
| Last Changed Date: 2020-04-27 14:56:38 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:42 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE Glimma PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 738/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Glimma 1.16.0 Shian Su
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: Glimma |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Glimma_1.16.0.tar.gz && rm -rf Glimma.buildbin-libdir && mkdir Glimma.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Glimma.buildbin-libdir Glimma_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Glimma_1.16.0.zip && rm Glimma_1.16.0.tar.gz Glimma_1.16.0.zip |
| StartedAt: 2020-10-16 17:21:58 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:23:04 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 66.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/Glimma_1.16.0.tar.gz && rm -rf Glimma.buildbin-libdir && mkdir Glimma.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Glimma.buildbin-libdir Glimma_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL Glimma_1.16.0.zip && rm Glimma_1.16.0.tar.gz Glimma_1.16.0.zip
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install for i386
* installing *source* package 'Glimma' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Glimma'
finding HTML links ... done
arraydata html
as.hexcol html
glBar html
glBar.default html
glMDPlot.DESeqDataSet html
glMDPlot.DESeqResults html
glMDPlot.DGEExact html
glMDPlot.DGELRT html
glMDPlot.MArrayLM html
glMDPlot html
glMDPlot.default html
glMDRmd html
glMDSPlot.DESeqDataSet html
glMDSPlot.DGEList html
glMDSPlot html
glMDSPlot.default html
glScatter html
glScatter.default html
glTable html
glXYPlot html
glimma html
gllink html
gltablink html
is.hex html
lymphomaRNAseq html
makeJson html
makeJson.data.frame html
makeJson.jschart html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Glimma' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Glimma' as Glimma_1.16.0.zip
* DONE (Glimma)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'Glimma' successfully unpacked and MD5 sums checked