Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:39 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE GeneRegionScan PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 689/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
GeneRegionScan 1.44.0 Lasse Folkersen
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: GeneRegionScan |
Version: 1.44.0 |
Command: rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.44.0.tar.gz |
StartedAt: 2020-10-17 10:36:36 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 10:37:25 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 49.6 seconds |
RetCode: 0 |
Status: OK |
PackageFile: GeneRegionScan_1.44.0.zip |
PackageFileSize: 7.658 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GeneRegionScan.buildbin-libdir && mkdir GeneRegionScan.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneRegionScan.buildbin-libdir GeneRegionScan_1.44.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'GeneRegionScan' ... ** using staged installation ** R ** data ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GeneRegionScan' finding HTML links ... done Nondocumented-objects html ProbeLevelSet-class html addSnpPdata html checkForFileInPath html doProbeLinear html doProbeTTest html exampleProbeLevelSet html excludeDoubleMatchingProbes html exonStructure html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp2jeC8P/R.INSTALL1d34572278bf/GeneRegionScan/man/exonStructure.rd:21: file link 'DNAString' in package 'Biostrings' does not exist and so has been treated as a topic findProbePositions html findSequenceInGenome html geneRegionScan html genomic html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp2jeC8P/R.INSTALL1d34572278bf/GeneRegionScan/man/genomic.Rd:13: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic getLocalMetaprobeIntensities html getLocalProbeIntensities html getMetaprobesetsFromRegionOfInterest html getProbeLevelAnnotationForExonArrays html getProbesetsFromMetaprobeset html getProbesetsFromRegionOfInterest html getSequence html getServerProbeIntensities html mrna html Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp2jeC8P/R.INSTALL1d34572278bf/GeneRegionScan/man/mrna.Rd:12: file link 'readDNAStringSet' in package 'Biostrings' does not exist and so has been treated as a topic plotCoexpression html plotOnGene html plotStatistics html readGeneInput html translateSampleNames html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GeneRegionScan' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GeneRegionScan' as GeneRegionScan_1.44.0.zip * DONE (GeneRegionScan)