Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:34 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE FitHiC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 600/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
FitHiC 1.14.0 Ruyu Tan
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
Package: FitHiC |
Version: 1.14.0 |
Command: rm -rf FitHiC.buildbin-libdir && mkdir FitHiC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FitHiC.buildbin-libdir FitHiC_1.14.0.tar.gz |
StartedAt: 2020-10-17 10:30:12 -0400 (Sat, 17 Oct 2020) |
EndedAt: 2020-10-17 10:31:10 -0400 (Sat, 17 Oct 2020) |
EllapsedTime: 58.1 seconds |
RetCode: 0 |
Status: OK |
PackageFile: FitHiC_1.14.0.zip |
PackageFileSize: 27.77 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf FitHiC.buildbin-libdir && mkdir FitHiC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FitHiC.buildbin-libdir FitHiC_1.14.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'FitHiC' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c FitHiC_init.c -o FitHiC_init.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c helper.cpp -o helper.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o FitHiC.dll tmp.def FitHiC_init.o RcppExports.o helper.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/FitHiC.buildbin-libdir/00LOCK-FitHiC/00new/FitHiC/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'FitHiC' finding HTML links ... done FitHiC html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'FitHiC' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c FitHiC_init.c -o FitHiC_init.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c helper.cpp -o helper.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o FitHiC.dll tmp.def FitHiC_init.o RcppExports.o helper.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/FitHiC.buildbin-libdir/FitHiC/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'FitHiC' as FitHiC_1.14.0.zip * DONE (FitHiC)