Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:56:34 -0400 (Sat, 17 Oct 2020).
TO THE DEVELOPERS/MAINTAINERS OF THE FindMyFriends PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 597/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
FindMyFriends 1.18.0 Thomas Lin Pedersen
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK |
Package: FindMyFriends |
Version: 1.18.0 |
Command: chmod a+r FindMyFriends -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data FindMyFriends |
StartedAt: 2020-10-16 21:38:12 -0400 (Fri, 16 Oct 2020) |
EndedAt: 2020-10-16 21:43:39 -0400 (Fri, 16 Oct 2020) |
EllapsedTime: 326.4 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r FindMyFriends -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data FindMyFriends ### ############################################################################## ############################################################################## * checking for file 'FindMyFriends/DESCRIPTION' ... OK * preparing 'FindMyFriends': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'FindMyFriends_intro.Rmd' using rmarkdown Found more than one class "file" in cache; using the first, from namespace 'BiocGenerics' Also defined by 'filehash' Found more than one class "file" in cache; using the first, from namespace 'BiocGenerics' Also defined by 'filehash' Preclustering resulted in 3326 gene groups (5.67 seconds elapsed) Grouping resulted in 3139 gene groups (5.5 seconds elapsed) Total time elapsed was 11.17 seconds Presplitting resulted in 3162 gene groups (0.05 seconds elapsed) Splitting resulted in 3602 gene groups (1 minute and 47.01 seconds elapsed) Merging resulted in 3399 gene groups (2.1 seconds elapsed) Total time elapsed was 1 minute and 49.16 seconds Quitting from lines 357-361 (FindMyFriends_intro.Rmd) Error: processing vignette 'FindMyFriends_intro.Rmd' failed with diagnostics: info doesn't match any org info --- failed re-building 'FindMyFriends_intro.Rmd' SUMMARY: processing the following file failed: 'FindMyFriends_intro.Rmd' Error: Vignette re-building failed. Execution halted