Farhad Shokoohi
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/DMCHMM |
| Branch: RELEASE_3_11 |
| Last Commit: 2be89e1 |
| Last Changed Date: 2020-04-27 15:09:50 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:28 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE DMCHMM PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 487/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DMCHMM 1.10.0 Farhad Shokoohi
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: DMCHMM |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/DMCHMM_1.10.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.10.0.zip && rm DMCHMM_1.10.0.tar.gz DMCHMM_1.10.0.zip |
| StartedAt: 2020-10-16 18:54:10 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:55:19 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 68.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/DMCHMM_1.10.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.10.0.zip && rm DMCHMM_1.10.0.tar.gz DMCHMM_1.10.0.zip
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install for i386
* installing *source* package 'DMCHMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** help
*** installing help indices
converting help for package 'DMCHMM'
finding HTML links ... done
BSDMCs-class html
BSData-class html
finding level-2 HTML links ... done
DMCHMM-package html
cBSDMCs-method html
cBSData-method html
combine-method html
data html
findDMCs-method html
manhattanDMCs-method html
methHMEM-method html
methHMMCMC-method html
methLevels-method html
methReads-method html
methStates-method html
methVars-method html
params html
qqDMCs-method html
readBismark-method html
totalReads-method html
writeBED-method html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DMCHMM' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
* MD5 sums
packaged installation of 'DMCHMM' as DMCHMM_1.10.0.zip
* DONE (DMCHMM)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'DMCHMM' successfully unpacked and MD5 sums checked