Likun Wang
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/DEGseq |
| Branch: RELEASE_3_11 |
| Last Commit: 3909472 |
| Last Changed Date: 2020-04-27 14:20:37 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:56:26 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE DEGseq PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 444/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DEGseq 1.42.0 Likun Wang
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: DEGseq |
| Version: 1.42.0 |
| Command: rm -rf DEGseq.buildbin-libdir && mkdir DEGseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEGseq.buildbin-libdir DEGseq_1.42.0.tar.gz |
| StartedAt: 2020-10-17 10:17:54 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 10:18:39 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 44.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: DEGseq_1.42.0.zip |
| PackageFileSize: 2.738 MiB |
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### Running command:
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### rm -rf DEGseq.buildbin-libdir && mkdir DEGseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEGseq.buildbin-libdir DEGseq_1.42.0.tar.gz
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install for i386
* installing *source* package 'DEGseq' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getGeneExp.cpp -o getGeneExp.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o DEGseq.dll tmp.def getGeneExp.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/DEGseq.buildbin-libdir/00LOCK-DEGseq/00new/DEGseq/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'DEGseq'
finding HTML links ... done
DEGexp html
DEGexp2 html
DEGseq html
GeneExpExample1000 html
GeneExpExample5000 html
getGeneExp html
kidneyChr21.bed html
kidneyChr21Bowtie html
liverChr21.bed html
liverChr21Bowtie html
readGeneExp html
refFlatChr21 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'DEGseq' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getGeneExp.cpp -o getGeneExp.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o DEGseq.dll tmp.def getGeneExp.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/DEGseq.buildbin-libdir/DEGseq/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DEGseq' as DEGseq_1.42.0.zip
* DONE (DEGseq)