Back to Multiple platform build/check report for BioC 3.11
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

BUILD BIN report for BioTIP on machv2

This page was generated on 2020-10-17 11:58:08 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BioTIP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 184/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioTIP 1.2.0
Zhezhen Wang , X Holly Yang < xyang2@uchicago> and Yuxi (Jennifer) Sun
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/BioTIP
Branch: RELEASE_3_11
Last Commit: 8c08cc8
Last Changed Date: 2020-04-27 15:30:56 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository

Summary

Package: BioTIP
Version: 1.2.0
Command: rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BioTIP_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BioTIP.buildbin-libdir
StartedAt: 2020-10-17 06:41:38 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 06:42:09 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 31.3 seconds
RetCode: 0
Status:  OK 
PackageFile: BioTIP_1.2.0.tgz
PackageFileSize: 2.572 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BioTIP.buildbin-libdir && mkdir BioTIP.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh BioTIP_1.2.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R BioTIP.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=BioTIP.buildbin-libdir BioTIP_1.2.0.tar.gz'
>>>>>>> 

* installing *source* package ‘BioTIP’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:40: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:52: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:55: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:58: unexpected section header '\value'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:63: unexpected section header '\description'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:68: unexpected section header '\examples'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:78: unexpected section header '\seealso'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:81: unexpected section header '\author'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/optimize.sd_selection.Rd:84: unexpected END_OF_INPUT '
'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:29: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:41: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:44: unknown macro '\item'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:47: unexpected section header '\value'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:54: unexpected section header '\description'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:61: unexpected section header '\examples'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:71: unexpected section header '\seealso'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:74: unexpected section header '\author'
Warning: /private/tmp/Rtmpp18Yp0/R.INSTALL3070387a0b4a/BioTIP/man/sd_selection.Rd:77: unexpected END_OF_INPUT '
'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BioTIP)