Gabriel Odom
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/pathwayPCA |
| Branch: RELEASE_3_10 |
| Last Commit: 3ee316f |
| Last Changed Date: 2019-10-29 13:11:33 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:32:03 -0400 (Wed, 15 Apr 2020).
| Package 1230/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| pathwayPCA 1.2.0 Gabriel Odom
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: pathwayPCA |
| Version: 1.2.0 |
| Command: rm -rf pathwayPCA.buildbin-libdir && mkdir pathwayPCA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pathwayPCA.buildbin-libdir pathwayPCA_1.2.0.tar.gz |
| StartedAt: 2020-04-15 09:21:03 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 09:21:44 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 41.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: pathwayPCA_1.2.0.zip |
| PackageFileSize: 2.81 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf pathwayPCA.buildbin-libdir && mkdir pathwayPCA.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pathwayPCA.buildbin-libdir pathwayPCA_1.2.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'pathwayPCA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'pathwayPCA'
finding HTML links ... done
AESPCA_pVals html
CheckAssay html
CheckPwyColl html
CheckSampleIDs html
Contains html
ControlFDR html
CreateOmics html
CreateOmicsPathway html
CreatePathwayCollection html
ExtractAESPCs html
GumbelMixpValues html
IntersectOmicsPwyCollct html
JoinPhenoAssay html
LoadOntoPCs html
OmicsCateg-class html
OmicsPathway-class html
OmicsReg-class html
OmicsSurv-class html
OptimGumbelMixParams html
PathwaytValues html
PermTestCateg html
PermTestReg html
PermTestSurv html
SE2Tidy html
SubsetPathwayCollection html
SubsetPathwayData html
SuperPCA_pVals html
TabulatepValues html
TransposeAssay html
ValidOmicsSurv html
WhichPathways html
aespca html
colonSurv_df html
colon_pathwayCollection html
coxTrain_fun html
getPathPCLs html
getPathpVals html
get_set_OmicsPathway html
get_set_OmicsRegCateg html
get_set_OmicsSurv html
glmTrain_fun html
lars.lsa html
mysvd html
normalize html
olsTrain_fun html
pathwayPCA-package html
pathway_tControl html
pathway_tScores html
permuteSamps html
print.pathwayCollection html
read_gmt html
show-OmicsPathway-method html
superpc.st html
superpc.train html
wikipwsHS_Entrez_pathwayCollection html
wikipwsHS_Symbol_pathwayCollection html
write_gmt html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'pathwayPCA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pathwayPCA' as pathwayPCA_1.2.0.zip
* DONE (pathwayPCA)