Britta Velten
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/graper |
| Branch: RELEASE_3_10 |
| Last Commit: f14bae8 |
| Last Changed Date: 2019-10-29 13:11:28 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:31:39 -0400 (Wed, 15 Apr 2020).
| Package 739/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| graper 1.2.0 Britta Velten
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ OK ] | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: graper |
| Version: 1.2.0 |
| Command: C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:graper.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings graper_1.2.0.tar.gz |
| StartedAt: 2020-04-15 03:40:43 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 03:42:32 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 108.6 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:graper.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings graper_1.2.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.10-bioc/meat/graper.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'graper/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'graper' version '1.2.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'graper' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... NOTE Note: information on .o files for i386 is not available Note: information on .o files for x64 is not available File 'C:/Users/biocbuild/bbs-3.10-bioc/R/library/graper/libs/i386/graper.dll': Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran) Found 'exit', possibly from 'exit' (C), 'stop' (Fortran) Found 'printf', possibly from 'printf' (C) File 'C:/Users/biocbuild/bbs-3.10-bioc/R/library/graper/libs/x64/graper.dll': Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran) Found 'exit', possibly from 'exit' (C), 'stop' (Fortran) Found 'printf', possibly from 'printf' (C) Compiled code should not call entry points which might terminate R nor write to stdout/stderr instead of to the console, nor use Fortran I/O nor system RNGs. The detected symbols are linked into the code but might come from libraries and not actually be called. See 'Writing portable packages' in the 'Writing R Extensions' manual. * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK ** running examples for arch 'x64' ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... Running 'testthat.R' OK ** running tests for arch 'x64' ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See 'C:/Users/biocbuild/bbs-3.10-bioc/meat/graper.Rcheck/00check.log' for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/graper_1.2.0.tar.gz && rm -rf graper.buildbin-libdir && mkdir graper.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graper.buildbin-libdir graper_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL graper_1.2.0.zip && rm graper_1.2.0.tar.gz graper_1.2.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 28911 100 28911 0 0 607k 0 --:--:-- --:--:-- --:--:-- 656k
install for i386
* installing *source* package 'graper' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c fit_graper.cpp -o fit_graper.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/graper.buildbin-libdir/00LOCK-graper/00new/graper/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'graper'
finding HTML links ... done
coef.graper html
getPIPs html
graper html
makeExampleData html
makeExampleDataWithUnequalGroups html
plotELBO html
plotGroupPenalties html
plotPosterior html
predict.graper html
print.graper html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'graper' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c fit_graper.cpp -o fit_graper.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o graper.dll tmp.def RcppExports.o fit_graper.o -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/graper.buildbin-libdir/graper/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'graper' as graper_1.2.0.zip
* DONE (graper)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'graper' successfully unpacked and MD5 sums checked
|
graper.Rcheck/tests_i386/testthat.Rout
R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-844.257
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.561
ELB improved by 266.697
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-514.502
ELB improved by 63.0587
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.945
ELB improved by 44.557
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.807
ELB improved by 20.1379
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.2
ELB improved by 7.60721
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.981
ELB improved by 4.21849
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.566
ELB improved by 3.41504
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.33
ELB improved by 3.23643
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.036
ELB improved by 3.29429
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.58
ELB improved by 3.4558
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.921
ELB improved by 3.65928
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.103
ELB improved by 3.8172
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.365
ELB improved by 3.73803
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.074
ELB improved by 3.29132
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.443
ELB improved by 2.63077
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.452
ELB improved by 1.99161
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.007
ELB improved by 1.44485
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.999
ELB improved by 1.00758
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.288
ELB improved by 0.71148
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.754
ELB improved by 0.533544
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.328
ELB improved by 0.426047
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.973
ELB improved by 0.355495
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.668
ELB improved by 0.304852
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.401
ELB improved by 0.266336
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.165
ELB improved by 0.236301
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.952
ELB improved by 0.212784
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.758
ELB improved by 0.194526
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.577
ELB improved by 0.180608
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.407
ELB improved by 0.170313
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.244
ELB improved by 0.163075
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.085
ELB improved by 0.158437
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.929
ELB improved by 0.156027
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.774
ELB improved by 0.155531
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.617
ELB improved by 0.156663
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.458
ELB improved by 0.159148
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.295
ELB improved by 0.162707
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.128
ELB improved by 0.167056
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.956
ELB improved by 0.171917
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.779
ELB improved by 0.17704
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.597
ELB improved by 0.182222
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.41
ELB improved by 0.18732
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.217
ELB improved by 0.192251
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.021
ELB improved by 0.196978
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.819
ELB improved by 0.201501
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.613
ELB improved by 0.205848
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.403
ELB improved by 0.210097
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.189
ELB improved by 0.214406
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.97
ELB improved by 0.219082
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.745
ELB improved by 0.224664
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.513
ELB improved by 0.232075
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.27
ELB improved by 0.242899
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.01
ELB improved by 0.259938
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.722
ELB improved by 0.28827
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.385
ELB improved by 0.336468
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.971
ELB improved by 0.414032
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.457
ELB improved by 0.514028
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.867
ELB improved by 0.590423
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.263
ELB improved by 0.603428
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.674
ELB improved by 0.588856
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.078
ELB improved by 0.596338
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.458
ELB improved by 0.62005
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.863
ELB improved by 0.594928
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.385
ELB improved by 0.477684
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.056
ELB improved by 0.329691
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.84
ELB improved by 0.215931
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.695
ELB improved by 0.14444
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.594
ELB improved by 0.101138
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.52
ELB improved by 0.0738861
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.465
ELB improved by 0.0557928
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.421
ELB improved by 0.0432455
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.387
ELB improved by 0.0342624
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.359
ELB improved by 0.0276645
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.337
ELB improved by 0.0227052
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.318
ELB improved by 0.0188954
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.302
ELB improved by 0.0159106
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.288
ELB improved by 0.0135333
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.277
ELB improved by 0.0116157
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.267
ELB improved by 0.0100547
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.258
ELB improved by 0.0087758
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-866.341
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.503
ELB improved by 302.838
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.205
ELB improved by 57.2977
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.222
ELB improved by 32.9832
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.066
ELB improved by 13.1558
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.065
ELB improved by 5.00115
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.943
ELB improved by 3.12163
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.297
ELB improved by 2.64656
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.7
ELB improved by 2.59672
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.945
ELB improved by 2.7546
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.915
ELB improved by 3.02978
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.584
ELB improved by 3.33108
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.087
ELB improved by 3.49748
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.766
ELB improved by 3.32105
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.024
ELB improved by 2.74192
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.032
ELB improved by 1.99218
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.667
ELB improved by 1.36475
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.704
ELB improved by 0.963268
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.96
ELB improved by 0.743997
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.323
ELB improved by 0.636936
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.73
ELB improved by 0.593146
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.145
ELB improved by 0.584995
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.547
ELB improved by 0.597474
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.925
ELB improved by 0.621919
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.272
ELB improved by 0.652815
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.586
ELB improved by 0.6866
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.864
ELB improved by 0.721461
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.107
ELB improved by 0.757195
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.313
ELB improved by 0.794586
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.478
ELB improved by 0.834362
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.602
ELB improved by 0.876135
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.685
ELB improved by 0.917599
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.73
ELB improved by 0.954118
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.751
ELB improved by 0.978932
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.767
ELB improved by 0.984315
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.803
ELB improved by 0.963761
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.889
ELB improved by 0.914428
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.051
ELB improved by 0.838444
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.308
ELB improved by 0.742207
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.674
ELB improved by 0.634395
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.149
ELB improved by 0.525025
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.724
ELB improved by 0.425307
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.379
ELB improved by 0.344417
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.094
ELB improved by 0.284696
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.854
ELB improved by 0.240686
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.651
ELB improved by 0.203221
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.484
ELB improved by 0.166397
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.353
ELB improved by 0.13105
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.252
ELB improved by 0.10096
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.174
ELB improved by 0.0780236
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.113
ELB improved by 0.0616017
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.063
ELB improved by 0.0500351
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.021
ELB improved by 0.0417587
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.985
ELB improved by 0.0356413
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.954
ELB improved by 0.0309506
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.927
ELB improved by 0.0272312
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.903
ELB improved by 0.0241997
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.881
ELB improved by 0.0216761
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.862
ELB improved by 0.0195416
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.844
ELB improved by 0.0177146
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.828
ELB improved by 0.0161372
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.813
ELB improved by 0.0147665
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.799
ELB improved by 0.0135696
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.787
ELB improved by 0.0125212
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.775
ELB improved by 0.011601
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.764
ELB improved by 0.010793
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.754
ELB improved by 0.0100845
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.745
ELB improved by 0.00946561
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.343
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-577.501
ELB improved by 294.842
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.976
ELB improved by 67.5251
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.857
ELB improved by 44.1188
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.202
ELB improved by 18.6553
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.231
ELB improved by 7.97061
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.388
ELB improved by 4.84257
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.425
ELB improved by 3.96359
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.546
ELB improved by 3.87878
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.388
ELB improved by 4.15765
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.798
ELB improved by 4.59071
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.884
ELB improved by 4.91356
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.114
ELB improved by 4.77029
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.121
ELB improved by 3.99263
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.277
ELB improved by 2.84444
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.479
ELB improved by 1.79782
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.384
ELB improved by 1.09465
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.687
ELB improved by 0.69694
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.199
ELB improved by 0.488379
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.817
ELB improved by 0.381526
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.489
ELB improved by 0.328468
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.183
ELB improved by 0.306037
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.879
ELB improved by 0.30371
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.563
ELB improved by 0.316639
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.222
ELB improved by 0.340947
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.851
ELB improved by 0.370171
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.456
ELB improved by 0.395912
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.042
ELB improved by 0.413759
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.616
ELB improved by 0.425306
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.183
ELB improved by 0.433431
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.743
ELB improved by 0.439698
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.298
ELB improved by 0.445078
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.848
ELB improved by 0.450579
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.39
ELB improved by 0.457242
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.924
ELB improved by 0.466061
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.446
ELB improved by 0.478176
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.951
ELB improved by 0.495612
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.427
ELB improved by 0.523141
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.855
ELB improved by 0.572679
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.186
ELB improved by 0.669074
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.364
ELB improved by 0.821775
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.45
ELB improved by 0.913543
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.603
ELB improved by 0.84766
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.877
ELB improved by 0.72557
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.276
ELB improved by 0.601544
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.791
ELB improved by 0.484705
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.409
ELB improved by 0.38215
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.111
ELB improved by 0.297481
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.881
ELB improved by 0.230606
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.701
ELB improved by 0.179611
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.559
ELB improved by 0.14183
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.445
ELB improved by 0.114441
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.35
ELB improved by 0.0948834
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.269
ELB improved by 0.0810471
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.198
ELB improved by 0.071264
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.133
ELB improved by 0.064219
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.074
ELB improved by 0.0588764
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.02
ELB improved by 0.0544615
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.97
ELB improved by 0.050465
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.923
ELB improved by 0.0466017
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.88
ELB improved by 0.0427118
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.842
ELB improved by 0.0386757
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.807
ELB improved by 0.0344176
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.777
ELB improved by 0.0299739
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.752
ELB improved by 0.0255335
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.73
ELB improved by 0.0213792
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.712
ELB improved by 0.0177626
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.698
ELB improved by 0.0148098
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.685
ELB improved by 0.0125121
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.674
ELB improved by 0.0107797
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.665
ELB improved by 0.00950071
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-877.414
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-594.536
ELB improved by 282.879
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-532.436
ELB improved by 62.0994
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-489.177
ELB improved by 43.2591
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.836
ELB improved by 20.3411
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.441
ELB improved by 8.39467
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.088
ELB improved by 5.35333
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.982
ELB improved by 5.10579
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.535
ELB improved by 5.44751
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.637
ELB improved by 5.89789
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.502
ELB improved by 6.13461
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.695
ELB improved by 5.80675
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.889
ELB improved by 4.80612
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.414
ELB improved by 3.47561
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.115
ELB improved by 2.2987
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.628
ELB improved by 1.48688
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.635
ELB improved by 0.992962
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.933
ELB improved by 0.702183
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.407
ELB improved by 0.526333
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.993
ELB improved by 0.413791
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.656
ELB improved by 0.33714
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.374
ELB improved by 0.282034
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.133
ELB improved by 0.24073
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.924
ELB improved by 0.20881
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.741
ELB improved by 0.183595
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.577
ELB improved by 0.16336
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.43
ELB improved by 0.146941
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.297
ELB improved by 0.133522
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.174
ELB improved by 0.122513
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.061
ELB improved by 0.113481
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.955
ELB improved by 0.106105
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.854
ELB improved by 0.100145
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.759
ELB improved by 0.0954306
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.667
ELB improved by 0.0918423
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.578
ELB improved by 0.0893135
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.49
ELB improved by 0.0878275
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.403
ELB improved by 0.0874251
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.314
ELB improved by 0.0882183
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.224
ELB improved by 0.0904114
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.13
ELB improved by 0.09433
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.029
ELB improved by 0.100447
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.92
ELB improved by 0.109372
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.798
ELB improved by 0.121755
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.66
ELB improved by 0.138003
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.502
ELB improved by 0.157891
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.322
ELB improved by 0.180303
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.118
ELB improved by 0.203404
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.893
ELB improved by 0.225238
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.648
ELB improved by 0.244912
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.384
ELB improved by 0.264143
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.097
ELB improved by 0.287217
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.778
ELB improved by 0.318494
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.419
ELB improved by 0.358963
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.017
ELB improved by 0.402759
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.58
ELB improved by 0.436956
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.13
ELB improved by 0.450133
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.688
ELB improved by 0.441489
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.271
ELB improved by 0.417395
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.887
ELB improved by 0.384192
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.54
ELB improved by 0.346601
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.231
ELB improved by 0.308602
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.958
ELB improved by 0.273831
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.712
ELB improved by 0.245413
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.487
ELB improved by 0.225474
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.272
ELB improved by 0.214168
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.064
ELB improved by 0.208445
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.862
ELB improved by 0.202386
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.671
ELB improved by 0.19086
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.498
ELB improved by 0.173125
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.346
ELB improved by 0.151978
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.215
ELB improved by 0.130613
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.104
ELB improved by 0.110812
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.011
ELB improved by 0.0929399
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.935
ELB improved by 0.0768134
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.872
ELB improved by 0.0624009
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.822
ELB improved by 0.0499326
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.783
ELB improved by 0.0396386
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.751
ELB improved by 0.0315177
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.726
ELB improved by 0.0253223
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.705
ELB improved by 0.0206784
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.688
ELB improved by 0.0172084
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.673
ELB improved by 0.0145972
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.661
ELB improved by 0.012608
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.65
ELB improved by 0.0110729
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.64
ELB improved by 0.00987561
ELB converged
== testthat results ===========================================================
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
>
> proc.time()
user system elapsed
2.48 0.18 2.65
|
graper.Rcheck/tests_x64/testthat.Rout
R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
Copyright (C) 2020 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.351
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-580.503
ELB improved by 287.848
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-518.437
ELB improved by 62.0658
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.579
ELB improved by 41.8579
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.451
ELB improved by 20.128
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.176
ELB improved by 8.27482
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.797
ELB improved by 4.37907
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.468
ELB improved by 3.32948
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.53
ELB improved by 2.93785
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.797
ELB improved by 2.73315
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.199
ELB improved by 2.5975
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.701
ELB improved by 2.49837
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.284
ELB improved by 2.41681
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.963
ELB improved by 2.32148
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.789
ELB improved by 2.17351
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.835
ELB improved by 1.95368
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.157
ELB improved by 1.67848
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.78
ELB improved by 1.37683
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.713
ELB improved by 1.06736
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.931
ELB improved by 0.78165
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.373
ELB improved by 0.558351
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.97
ELB improved by 0.403003
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.672
ELB improved by 0.297594
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.447
ELB improved by 0.225608
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.269
ELB improved by 0.177092
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.125
ELB improved by 0.144986
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.001
ELB improved by 0.123721
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.891
ELB improved by 0.109307
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.792
ELB improved by 0.0991721
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.701
ELB improved by 0.0917455
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.614
ELB improved by 0.086085
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.533
ELB improved by 0.0816403
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.455
ELB improved by 0.0781182
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.379
ELB improved by 0.075391
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.306
ELB improved by 0.0734181
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.234
ELB improved by 0.072183
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.162
ELB improved by 0.0716607
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.09
ELB improved by 0.0718142
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.018
ELB improved by 0.0726056
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.944
ELB improved by 0.0740069
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.868
ELB improved by 0.0760049
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.789
ELB improved by 0.0786022
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.707
ELB improved by 0.081817
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.622
ELB improved by 0.0856829
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.531
ELB improved by 0.0902514
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.436
ELB improved by 0.0955958
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.334
ELB improved by 0.101817
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.225
ELB improved by 0.109052
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.107
ELB improved by 0.117482
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.98
ELB improved by 0.127336
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.841
ELB improved by 0.138896
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.689
ELB improved by 0.152479
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.52
ELB improved by 0.168409
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.333
ELB improved by 0.186966
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.125
ELB improved by 0.208356
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.892
ELB improved by 0.232722
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.632
ELB improved by 0.260219
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.341
ELB improved by 0.291096
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.015
ELB improved by 0.325682
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.651
ELB improved by 0.364263
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.244
ELB improved by 0.406872
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.791
ELB improved by 0.453046
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.289
ELB improved by 0.501495
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.74
ELB improved by 0.549657
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.147
ELB improved by 0.593242
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.52
ELB improved by 0.626131
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.879
ELB improved by 0.641138
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.247
ELB improved by 0.632026
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.651
ELB improved by 0.596246
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.114
ELB improved by 0.536855
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.652
ELB improved by 0.46202
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.27
ELB improved by 0.382107
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.964
ELB improved by 0.306172
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.724
ELB improved by 0.239858
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.539
ELB improved by 0.18528
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.397
ELB improved by 0.14212
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.288
ELB improved by 0.108893
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.204
ELB improved by 0.083787
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.139
ELB improved by 0.065052
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.088
ELB improved by 0.0511524
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.047
ELB improved by 0.0408303
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.014
ELB improved by 0.0331222
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.986
ELB improved by 0.0273261
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.964
ELB improved by 0.0229411
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.944
ELB improved by 0.0196062
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.927
ELB improved by 0.0170545
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.912
ELB improved by 0.0150838
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.898
ELB improved by 0.0135389
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.886
ELB improved by 0.0123006
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.875
ELB improved by 0.0112784
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.864
ELB improved by 0.0104056
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.855
ELB improved by 0.00963509
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-885.59
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-578.003
ELB improved by 307.587
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.51
ELB improved by 60.4937
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.055
ELB improved by 37.4544
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.114
ELB improved by 16.9411
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.835
ELB improved by 7.27964
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.632
ELB improved by 4.20213
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.36
ELB improved by 3.27222
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.365
ELB improved by 2.99472
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.399
ELB improved by 2.96601
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.348
ELB improved by 3.05119
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.156
ELB improved by 3.19184
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.818
ELB improved by 3.33874
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.398
ELB improved by 3.41977
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.087
ELB improved by 3.31055
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.231
ELB improved by 2.85621
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.098
ELB improved by 2.13281
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.63
ELB improved by 1.4688
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.603
ELB improved by 1.02607
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.843
ELB improved by 0.760779
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.246
ELB improved by 0.597146
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.749
ELB improved by 0.496449
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.311
ELB improved by 0.438568
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.903
ELB improved by 0.40787
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.51
ELB improved by 0.392906
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.123
ELB improved by 0.386503
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.739
ELB improved by 0.384613
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.354
ELB improved by 0.385133
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.966
ELB improved by 0.387101
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.576
ELB improved by 0.390227
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.182
ELB improved by 0.394612
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.781
ELB improved by 0.40057
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.372
ELB improved by 0.408541
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.953
ELB improved by 0.419093
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.52
ELB improved by 0.433098
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.068
ELB improved by 0.452113
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.589
ELB improved by 0.478835
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.073
ELB improved by 0.516573
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.508
ELB improved by 0.564877
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.896
ELB improved by 0.612001
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.255
ELB improved by 0.640639
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.607
ELB improved by 0.648721
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.959
ELB improved by 0.647205
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.313
ELB improved by 0.646025
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.657
ELB improved by 0.656407
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.959
ELB improved by 0.698281
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.158
ELB improved by 0.800838
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.197
ELB improved by 0.960266
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.179
ELB improved by 1.01807
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.34
ELB improved by 0.839707
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.762
ELB improved by 0.57817
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.388
ELB improved by 0.373155
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.144
ELB improved by 0.24433
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.975
ELB improved by 0.169318
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.849
ELB improved by 0.126014
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.749
ELB improved by 0.0999913
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.666
ELB improved by 0.0826674
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.597
ELB improved by 0.0693359
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.539
ELB improved by 0.0579179
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.491
ELB improved by 0.0479356
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.451
ELB improved by 0.0395364
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.419
ELB improved by 0.0328171
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.391
ELB improved by 0.0276193
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.367
ELB improved by 0.0236296
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.347
ELB improved by 0.0205257
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.329
ELB improved by 0.0180516
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.313
ELB improved by 0.0160283
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.298
ELB improved by 0.0143372
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.285
ELB improved by 0.0129005
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.274
ELB improved by 0.0116655
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.263
ELB improved by 0.0105951
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.254
ELB improved by 0.00966182
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-904.039
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-589.636
ELB improved by 314.403
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-530.613
ELB improved by 59.0236
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-494.557
ELB improved by 36.0556
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-477.987
ELB improved by 16.5697
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.994
ELB improved by 7.99362
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.653
ELB improved by 5.34054
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.001
ELB improved by 4.65172
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.561
ELB improved by 4.44011
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.299
ELB improved by 4.26248
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.398
ELB improved by 3.90114
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.098
ELB improved by 3.30004
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.531
ELB improved by 2.5669
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.65
ELB improved by 1.88085
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.292
ELB improved by 1.35824
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.28
ELB improved by 1.01133
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.483
ELB improved by 0.797786
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.812
ELB improved by 0.670154
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.222
ELB improved by 0.590636
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.693
ELB improved by 0.529025
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.226
ELB improved by 0.466645
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.823
ELB improved by 0.403004
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.477
ELB improved by 0.346357
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.176
ELB improved by 0.300886
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.91
ELB improved by 0.265795
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.671
ELB improved by 0.238809
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.453
ELB improved by 0.217942
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.252
ELB improved by 0.20179
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.062
ELB improved by 0.189425
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.882
ELB improved by 0.180256
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.708
ELB improved by 0.17394
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.538
ELB improved by 0.170315
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.368
ELB improved by 0.169336
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.197
ELB improved by 0.170968
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.022
ELB improved by 0.175021
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.841
ELB improved by 0.181003
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.653
ELB improved by 0.188141
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.458
ELB improved by 0.19559
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.255
ELB improved by 0.202495
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.047
ELB improved by 0.207885
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.836
ELB improved by 0.211095
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.624
ELB improved by 0.212503
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.41
ELB improved by 0.213468
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.195
ELB improved by 0.215537
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.975
ELB improved by 0.219815
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.748
ELB improved by 0.226782
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.512
ELB improved by 0.236347
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.264
ELB improved by 0.247991
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.003
ELB improved by 0.260873
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.729
ELB improved by 0.273897
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.443
ELB improved by 0.285785
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.148
ELB improved by 0.29526
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.847
ELB improved by 0.301246
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.544
ELB improved by 0.302998
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.243
ELB improved by 0.300136
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.951
ELB improved by 0.292658
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.67
ELB improved by 0.280976
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.404
ELB improved by 0.265889
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.155
ELB improved by 0.248443
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.926
ELB improved by 0.229726
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.715
ELB improved by 0.210676
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.523
ELB improved by 0.191965
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.349
ELB improved by 0.173972
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.192
ELB improved by 0.156817
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.052
ELB improved by 0.140467
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.927
ELB improved by 0.124866
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.817
ELB improved by 0.110065
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.721
ELB improved by 0.0962531
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.637
ELB improved by 0.0836751
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.565
ELB improved by 0.0725054
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.502
ELB improved by 0.0627845
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.447
ELB improved by 0.0544329
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.4
ELB improved by 0.0473028
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.359
ELB improved by 0.0412271
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.323
ELB improved by 0.0360466
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.291
ELB improved by 0.0316215
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.263
ELB improved by 0.0278333
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.239
ELB improved by 0.0245826
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.217
ELB improved by 0.0217867
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.198
ELB improved by 0.0193764
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.18
ELB improved by 0.0172939
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.165
ELB improved by 0.0154907
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.151
ELB improved by 0.013926
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.138
ELB improved by 0.0125655
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.127
ELB improved by 0.0113802
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.117
ELB improved by 0.0103455
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.107
ELB improved by 0.00944079
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-852.346
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-563.783
ELB improved by 288.563
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.183
ELB improved by 57.5998
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.687
ELB improved by 37.4962
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.581
ELB improved by 19.106
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.632
ELB improved by 8.94866
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.322
ELB improved by 5.31002
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.095
ELB improved by 4.22721
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.114
ELB improved by 3.98108
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.142
ELB improved by 3.97181
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.205
ELB improved by 3.93725
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.479
ELB improved by 3.72545
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.191
ELB improved by 3.28885
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.469
ELB improved by 2.72108
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.283
ELB improved by 2.186
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.5
ELB improved by 1.78369
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.024
ELB improved by 1.47552
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.809
ELB improved by 1.21574
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.804
ELB improved by 1.00489
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.989
ELB improved by 0.814857
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.356
ELB improved by 0.633087
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.872
ELB improved by 0.483348
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.493
ELB improved by 0.379384
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.178
ELB improved by 0.31534
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.899
ELB improved by 0.278685
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.64
ELB improved by 0.258915
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.391
ELB improved by 0.249353
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.144
ELB improved by 0.246219
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.897
ELB improved by 0.247508
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.645
ELB improved by 0.252261
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.385
ELB improved by 0.260183
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.113
ELB improved by 0.271472
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.826
ELB improved by 0.286768
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.519
ELB improved by 0.307212
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.184
ELB improved by 0.334619
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.813
ELB improved by 0.371876
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.389
ELB improved by 0.423807
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.89
ELB improved by 0.499097
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.275
ELB improved by 0.614226
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.478
ELB improved by 0.797133
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.417
ELB improved by 1.06149
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.103
ELB improved by 1.31388
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.68
ELB improved by 1.42333
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.293
ELB improved by 1.38642
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.071
ELB improved by 1.22199
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.091
ELB improved by 0.980219
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.359
ELB improved by 0.732264
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.834
ELB improved by 0.524456
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.464
ELB improved by 0.370561
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.2
ELB improved by 0.264142
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.007
ELB improved by 0.192645
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.862
ELB improved by 0.144993
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.749
ELB improved by 0.113371
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.656
ELB improved by 0.0926103
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.577
ELB improved by 0.0791069
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.507
ELB improved by 0.0698859
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.445
ELB improved by 0.0621423
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.391
ELB improved by 0.0536917
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.347
ELB improved by 0.0440214
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.313
ELB improved by 0.0343598
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.287
ELB improved by 0.0261925
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.266
ELB improved by 0.0200498
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.251
ELB improved by 0.0156461
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.238
ELB improved by 0.0124825
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.228
ELB improved by 0.0101557
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.22
ELB improved by 0.00839888
ELB converged
== testthat results ===========================================================
[ OK: 24 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 0 ]
>
> proc.time()
user system elapsed
2.67 0.25 2.90
|
|
graper.Rcheck/examples_i386/graper-Ex.timings
|
graper.Rcheck/examples_x64/graper-Ex.timings
|