Peter M. Haverty
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/genoset |
| Branch: RELEASE_3_10 |
| Last Commit: 8bd8fd5 |
| Last Changed Date: 2019-10-29 13:08:20 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:06:19 -0400 (Wed, 15 Apr 2020).
| Package 689/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| genoset 1.42.0 Peter M. Haverty
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: genoset |
| Version: 1.42.0 |
| Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL genoset |
| StartedAt: 2020-04-14 18:40:08 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:40:38 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 30.0 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL genoset ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’ * installing *source* package ‘genoset’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c bounds.c -o bounds.o gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c init.c -o init.o gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c rangeSummaries.c -o rangeSummaries.o gcc -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c utils.c -o utils.o gcc -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o genoset.so bounds.o init.o rangeSummaries.o utils.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-genoset/00new/genoset/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading From .checkSubclasses(): subclass "GenomicPos" of class "GenomicRanges" is not local and is not updated for new inheritance information currently; [where=<environment: 0x55bfc98e1688>, where2=<environment: namespace:genoset>] From .checkSubclasses(): subclass "UnstitchedGPos" of class "GenomicRanges" is not local and is not updated for new inheritance information currently; [where=<environment: 0x55bfc98e1688>, where2=<environment: namespace:genoset>] From .checkSubclasses(): subclass "StitchedGPos" of class "GenomicRanges" is not local and is not updated for new inheritance information currently; [where=<environment: 0x55bfc98e1688>, where2=<environment: namespace:genoset>] From .checkSubclasses(): subclass "UnstitchedGPos" of class "GenomicRanges" is not local and is not updated for new inheritance information currently; [where=<environment: 0x55bfc98e1688>, where2=<environment: namespace:genoset>] From .checkSubclasses(): subclass "StitchedGPos" of class "GenomicRanges" is not local and is not updated for new inheritance information currently; [where=<environment: 0x55bfc98e1688>, where2=<environment: namespace:genoset>] ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (genoset)