Nima Aghaeepour
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/flowType |
| Branch: RELEASE_3_10 |
| Last Commit: 457df53 |
| Last Changed Date: 2019-10-29 13:08:21 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:19:59 -0400 (Wed, 15 Apr 2020).
| Package 605/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| flowType 2.24.0 Nima Aghaeepour
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | ERROR | OK | [ ERROR ] | ERROR | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: flowType |
| Version: 2.24.0 |
| Command: C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:flowType.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings flowType_2.24.0.tar.gz |
| StartedAt: 2020-04-15 03:15:35 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 03:15:40 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 4.6 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: flowType.Rcheck |
| Warnings: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:flowType.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings flowType_2.24.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.10-bioc/meat/flowType.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'flowType/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'flowType' version '2.24.0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'flowType' can be installed ... ERROR Installation failed. See 'C:/Users/biocbuild/bbs-3.10-bioc/meat/flowType.Rcheck/00install.out' for details. * DONE Status: 1 ERROR See 'C:/Users/biocbuild/bbs-3.10-bioc/meat/flowType.Rcheck/00check.log' for details.
flowType.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/flowType_2.24.0.tar.gz && rm -rf flowType.buildbin-libdir && mkdir flowType.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=flowType.buildbin-libdir flowType_2.24.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL flowType_2.24.0.zip && rm flowType_2.24.0.tar.gz flowType_2.24.0.zip
###
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install for i386
* installing *source* package 'flowType' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c countsAndMeans.cpp -o countsAndMeans.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c flowType.cpp -o flowType.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c numberGenerator.cpp -o numberGenerator.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o flowType.dll tmp.def countsAndMeans.o flowType.o numberGenerator.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/flowType.buildbin-libdir/00LOCK-flowType/00new/flowType/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in library.dynam(dynlib, pkg, lib) :
DLL 'rgl' not found: maybe not installed for this architecture?
Error: .onLoad failed in loadNamespace() for 'rgl', details:
call: NULL
error: Loading rgl's DLL failed.
Execution halted
ERROR: lazy loading failed for package 'flowType'
* removing 'C:/Users/biocbuild/bbs-3.10-bioc/meat/flowType.buildbin-libdir/flowType'