Michael Love
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/fishpond |
| Branch: RELEASE_3_10 |
| Last Commit: fd4c1b0 |
| Last Changed Date: 2019-10-29 13:11:30 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:31:51 -0400 (Wed, 15 Apr 2020).
| Package 574/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| fishpond 1.2.0 Michael Love
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: fishpond |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/fishpond_1.2.0.tar.gz && rm -rf fishpond.buildbin-libdir && mkdir fishpond.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fishpond.buildbin-libdir fishpond_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL fishpond_1.2.0.zip && rm fishpond_1.2.0.tar.gz fishpond_1.2.0.zip |
| StartedAt: 2020-04-14 19:38:06 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:38:56 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 49.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/fishpond_1.2.0.tar.gz && rm -rf fishpond.buildbin-libdir && mkdir fishpond.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=fishpond.buildbin-libdir fishpond_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL fishpond_1.2.0.zip && rm fishpond_1.2.0.tar.gz fishpond_1.2.0.zip
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install for i386
* installing *source* package 'fishpond' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c readEDS.cpp -o readEDS.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o fishpond.dll tmp.def RcppExports.o readEDS.o -lz -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/fishpond.buildbin-libdir/00LOCK-fishpond/00new/fishpond/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'fishpond'
finding HTML links ... done
computeInfRV html
deswish html
labelKeep html
makeSimSwishData html
plotInfReps html
plotMASwish html
readEDS html
scaleInfReps html
swish html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'fishpond' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c readEDS.cpp -o readEDS.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o fishpond.dll tmp.def RcppExports.o readEDS.o -lz -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/fishpond.buildbin-libdir/fishpond/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fishpond' as fishpond_1.2.0.zip
* DONE (fishpond)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'fishpond' successfully unpacked and MD5 sums checked