Henrik Bengtsson
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/aroma.light |
| Branch: RELEASE_3_10 |
| Last Commit: fc16179 |
| Last Changed Date: 2019-10-29 13:07:43 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:17:42 -0400 (Wed, 15 Apr 2020).
| Package 76/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| aroma.light 3.16.0 Henrik Bengtsson
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: aroma.light |
| Version: 3.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/aroma.light_3.16.0.tar.gz && rm -rf aroma.light.buildbin-libdir && mkdir aroma.light.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=aroma.light.buildbin-libdir aroma.light_3.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL aroma.light_3.16.0.zip && rm aroma.light_3.16.0.tar.gz aroma.light_3.16.0.zip |
| StartedAt: 2020-04-14 18:34:44 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:35:53 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 69.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/aroma.light_3.16.0.tar.gz && rm -rf aroma.light.buildbin-libdir && mkdir aroma.light.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=aroma.light.buildbin-libdir aroma.light_3.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL aroma.light_3.16.0.zip && rm aroma.light_3.16.0.tar.gz aroma.light_3.16.0.zip
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install for i386
* installing *source* package 'aroma.light' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'aroma.light'
finding HTML links ... done
1._Calibration_and_Normalization html
Non-documented_objects html
aroma.light-package html
averageQuantile html
backtransformAffine html
backtransformPrincipalCurve html
calibrateMultiscan html
callNaiveGenotypes html
distanceBetweenLines html
findPeaksAndValleys html
fitIWPCA html
fitNaiveGenotypes html
fitPrincipalCurve html
fitXYCurve html
iwpca html
likelihood.smooth.spline html
medianPolish html
normalizeAffine html
normalizeAverage html
normalizeCurveFit html
normalizeDifferencesToAverage html
normalizeFragmentLength html
normalizeQuantileRank html
normalizeQuantileRank.matrix html
normalizeQuantileSpline html
normalizeTumorBoost html
pairedAlleleSpecificCopyNumbers html
plotDensity html
plotMvsA html
plotMvsAPairs html
plotMvsMPairs html
plotXYCurve html
print.SmoothSplineLikelihood html
robustSmoothSpline html
sampleCorrelations html
sampleTuples html
wpca html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'aroma.light' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'aroma.light' as aroma.light_3.16.0.zip
* DONE (aroma.light)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'aroma.light' successfully unpacked and MD5 sums checked