Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:10:51 -0400 (Wed, 15 Apr 2020).
Package 1519/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
SC3 1.14.0 Vladimir Kiselev
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: SC3 |
Version: 1.14.0 |
Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL SC3 |
StartedAt: 2020-04-14 18:36:11 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 18:36:55 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 44.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL SC3 ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’ * installing *source* package ‘SC3’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I/usr/local/include -fpic -g -O2 -Wall -c cppFunctions.cpp -o cppFunctions.o cppFunctions.cpp: In function ‘arma::mat consmx(arma::mat)’: cppFunctions.cpp:63:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (j = 0; j < dat.n_cols; j++) { ~~^~~~~~~~~~~~ cppFunctions.cpp:64:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (i = 0; i < dat.n_rows; i++) { ~~^~~~~~~~~~~~ cppFunctions.cpp:65:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (k = i + 1; k < dat.n_rows; k++) { ~~^~~~~~~~~~~~ g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o SC3.so RcppExports.o cppFunctions.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-SC3/00new/SC3/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SC3)