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This page was generated on 2020-04-15 12:24:16 -0400 (Wed, 15 Apr 2020).
| Package 1462/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Shilin Zhao
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | ERROR | |||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | ERROR | OK | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | ERROR | OK |
| Package: RnaSeqSampleSize |
| Version: 1.18.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/RnaSeqSampleSize_1.18.0.tar.gz && rm -rf RnaSeqSampleSize.buildbin-libdir && mkdir RnaSeqSampleSize.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RnaSeqSampleSize.buildbin-libdir RnaSeqSampleSize_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL RnaSeqSampleSize_1.18.0.zip && rm RnaSeqSampleSize_1.18.0.tar.gz RnaSeqSampleSize_1.18.0.zip |
| StartedAt: 2020-04-14 19:22:38 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:23:39 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 61.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/RnaSeqSampleSize_1.18.0.tar.gz && rm -rf RnaSeqSampleSize.buildbin-libdir && mkdir RnaSeqSampleSize.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RnaSeqSampleSize.buildbin-libdir RnaSeqSampleSize_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL RnaSeqSampleSize_1.18.0.zip && rm RnaSeqSampleSize_1.18.0.tar.gz RnaSeqSampleSize_1.18.0.zip
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install for i386
* installing *source* package 'RnaSeqSampleSize' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c RnaSeqSampleSize.c -o RnaSeqSampleSize.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c bd0.c -o bd0.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c cumsumBorder.cpp -o cumsumBorder.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=core2 -c stirlerr.c -o stirlerr.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RnaSeqSampleSize.dll tmp.def RcppExports.o RnaSeqSampleSize.o bd0.o cumsumBorder.o stirlerr.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/RnaSeqSampleSize.buildbin-libdir/00LOCK-RnaSeqSampleSize/00new/RnaSeqSampleSize/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RnaSeqSampleSize'
finding HTML links ... done
convertIdOneToOne html
est_count_dispersion html
est_power html
est_power_curve html
est_power_distribution html
optimize_parameter html
plot_power_curve html
sample_size html
sample_size_distribution html
** building package indices
** installing vignettes
'RnaSeqSampleSize.Rnw'
** testing if installed package can be loaded from temporary location
Warning: Package 'RnaSeqSampleSize' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package can be loaded from final location
Warning: Package 'RnaSeqSampleSize' is deprecated and will be removed from
Bioconductor version 3.11
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RnaSeqSampleSize' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c RnaSeqSampleSize.c -o RnaSeqSampleSize.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c bd0.c -o bd0.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c cumsumBorder.cpp -o cumsumBorder.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=core2 -c stirlerr.c -o stirlerr.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RnaSeqSampleSize.dll tmp.def RcppExports.o RnaSeqSampleSize.o bd0.o cumsumBorder.o stirlerr.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/RnaSeqSampleSize.buildbin-libdir/RnaSeqSampleSize/libs/x64
** testing if installed package can be loaded
Warning: Package 'RnaSeqSampleSize' is deprecated and will be removed from
Bioconductor version 3.11
* MD5 sums
packaged installation of 'RnaSeqSampleSize' as RnaSeqSampleSize_1.18.0.zip
* DONE (RnaSeqSampleSize)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'RnaSeqSampleSize' successfully unpacked and MD5 sums checked