Adrin Jalali
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/RchyOptimyx |
| Branch: RELEASE_3_10 |
| Last Commit: 7b26205 |
| Last Changed Date: 2019-10-29 13:08:30 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:06:54 -0400 (Wed, 15 Apr 2020).
| Package 1384/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RchyOptimyx 2.26.0 Adrin Jalali
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | [ OK ] | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | ERROR | OK | ERROR | ERROR | |||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: RchyOptimyx |
| Version: 2.26.0 |
| Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL RchyOptimyx |
| StartedAt: 2020-04-14 18:30:16 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:30:36 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 20.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL RchyOptimyx
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* installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’
* installing *source* package ‘RchyOptimyx’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c RchyOptimyx.cpp -o RchyOptimyx.o
In file included from graehl/graph.h:279:0,
from RchyOptimyx.cpp:13:
graehl/kbest.h: In function ‘void buildSidetracksHeap(int, int)’:
graehl/kbest.h:322:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
} else
^~~~
graehl/kbest.h:324:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
pathGraph[state] = newTreeHeapAdd(prev, pathGraph[state]);
^~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c dataRead.cpp -o dataRead.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c mystring.cpp -o mystring.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c numberGenerator.cpp -o numberGenerator.o
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o RchyOptimyx.so RchyOptimyx.o dataRead.o mystring.o numberGenerator.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-RchyOptimyx/00new/RchyOptimyx/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘merge’ in package ‘RchyOptimyx’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RchyOptimyx)