Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:47:29 -0400 (Wed, 15 Apr 2020).
Package 972/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
MBttest 1.14.0 Yuan-De Tan
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | [ OK ] | OK |
Package: MBttest |
Version: 1.14.0 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:MBttest.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings MBttest_1.14.0.tar.gz |
StartedAt: 2020-04-15 03:36:20 -0400 (Wed, 15 Apr 2020) |
EndedAt: 2020-04-15 03:37:03 -0400 (Wed, 15 Apr 2020) |
EllapsedTime: 42.6 seconds |
RetCode: 0 |
Status: OK |
CheckDir: MBttest.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --install=check:MBttest.install-out.txt --library=/Library/Frameworks/R.framework/Versions/Current/Resources/library --no-vignettes --timings MBttest_1.14.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.10-bioc/meat/MBttest.Rcheck’ * using R version 3.6.3 (2020-02-29) * using platform: x86_64-apple-darwin15.6.0 (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘MBttest/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘MBttest’ version ‘1.14.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MBttest’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU or elapsed time > 5s user system elapsed myheatmap 5.739 0.116 5.925 * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
MBttest.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL MBttest ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library’ * installing *source* package ‘MBttest’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MBttest)
MBttest.Rcheck/MBttest-Ex.timings
name | user | system | elapsed | |
MBttest-package | 0.753 | 0.059 | 0.815 | |
betaparametVP | 0.201 | 0.007 | 0.208 | |
betaparametab | 0.000 | 0.000 | 0.001 | |
betaparametw | 0.001 | 0.000 | 0.001 | |
betattest | 0.679 | 0.025 | 0.711 | |
dat | 0.070 | 0.009 | 0.080 | |
jkttcell | 0.043 | 0.008 | 0.051 | |
maplot | 0.564 | 0.021 | 0.655 | |
mbetattest | 1.857 | 0.026 | 1.892 | |
mtprocedure | 0.024 | 0.001 | 0.025 | |
mtpvadjust | 0.003 | 0.000 | 0.003 | |
myheatmap | 5.739 | 0.116 | 5.925 | |
oddratio | 0.002 | 0.000 | 0.002 | |
pratio | 0.000 | 0.001 | 0.001 | |
simulat | 0.320 | 0.005 | 0.328 | |
skjt | 0.051 | 0.003 | 0.054 | |
smbetattest | 0.725 | 0.013 | 0.749 | |