Ali Oghabian
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/IntEREst |
| Branch: RELEASE_3_10 |
| Last Commit: 9af72d5 |
| Last Changed Date: 2019-12-17 09:35:22 -0400 (Tue, 17 Dec 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:28:06 -0400 (Wed, 15 Apr 2020).
| Package 854/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| IntEREst 1.10.2 Ali Oghabian
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: IntEREst |
| Version: 1.10.2 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/IntEREst_1.10.2.tar.gz && rm -rf IntEREst.buildbin-libdir && mkdir IntEREst.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IntEREst.buildbin-libdir IntEREst_1.10.2.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL IntEREst_1.10.2.zip && rm IntEREst_1.10.2.tar.gz IntEREst_1.10.2.zip |
| StartedAt: 2020-04-14 19:56:35 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:58:15 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 100.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/IntEREst_1.10.2.tar.gz && rm -rf IntEREst.buildbin-libdir && mkdir IntEREst.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IntEREst.buildbin-libdir IntEREst_1.10.2.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL IntEREst_1.10.2.zip && rm IntEREst_1.10.2.tar.gz IntEREst_1.10.2.zip
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install for i386
* installing *source* package 'IntEREst' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'IntEREst'
finding HTML links ... done
DEXSeqIntEREst html
IntEREst-package html
addAnnotation html
annotateU12 html
applyOverlap html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpAl6zfv/R.INSTALL5147d667482/IntEREst/man/applyOverlap.Rd:36: file link 'findOverlaps' in package 'IRanges' does not exist and so has been treated as a topic
attributes html
boxplot-method html
buildSsTypePwms html
counts-method html
deseqInterest html
exactTestInterest html
getRepeatTable html
glmInterest html
interest html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpAl6zfv/R.INSTALL5147d667482/IntEREst/man/interest.Rd:91: file link 'BamFile' in package 'Rsamtools' does not exist and so has been treated as a topic
interest.sequential html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpAl6zfv/R.INSTALL5147d667482/IntEREst/man/interest.sequential.Rd:87: file link 'BamFile' in package 'Rsamtools' does not exist and so has been treated as a topic
interestResult html
interestResultIntEx html
intexIndex html
lfc html
mdsChr22ExObj html
mdsChr22IntSpObj html
mdsChr22Obj html
mergeInterestResult html
plot-method html
psi html
pwmU12db html
qlfInterest html
readInterestResults html
referencePrepare html
subInterestResult html
treatInterest html
u12 html
u12Boxplot html
u12BoxplotNb html
u12DensityPlot html
u12Index html
u12NbIndex html
unionRefTr html
updateRowDataCol html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'IntEREst' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IntEREst' as IntEREst_1.10.2.zip
* DONE (IntEREst)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'IntEREst' successfully unpacked and MD5 sums checked