Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:27:38 -0400 (Wed, 15 Apr 2020).
Package 880/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
IWTomics 1.10.0 Marzia A Cremona
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
Package: IWTomics |
Version: 1.10.0 |
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/IWTomics_1.10.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.10.0.zip && rm IWTomics_1.10.0.tar.gz IWTomics_1.10.0.zip |
StartedAt: 2020-04-14 19:29:59 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 19:31:02 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 62.5 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/IWTomics_1.10.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.10.0.zip && rm IWTomics_1.10.0.tar.gz IWTomics_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 678k 100 678k 0 0 11.9M 0 --:--:-- --:--:-- --:--:-- 13.0M install for i386 * installing *source* package 'IWTomics' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'smooth' in package 'IWTomics' ** help *** installing help indices converting help for package 'IWTomics' finding HTML links ... done ETn_example html IWTomics-internal html IWTomics-package html IWTomicsData-class html Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsData-class.Rd:60: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsData-class.Rd:135: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsData-class.Rd:168: file link 'read.delim' in package 'utils' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsData-class.Rd:308: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsData-class.Rd:309: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic IWTomicsTest html Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsTest.Rd:61: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsTest.Rd:64: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsTest.Rd:79: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/IWTomicsTest.Rd:80: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic features_example html plot-IWTomicsData html Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/plot-IWTomicsData.Rd:96: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic plotSummary html plotTest html regionsFeatures_center html regionsFeatures_scale html regions_example html Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/regions_example.Rd:19: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/regions_example.Rd:15: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic smooth-IWTomicsData html Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/Rtmp0WWxY8/R.INSTALL1bbc744b1be9/IWTomics/man/smooth-IWTomicsData.Rd:78: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'IWTomics' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'IWTomics' as IWTomics_1.10.0.zip * DONE (IWTomics) * installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library' package 'IWTomics' successfully unpacked and MD5 sums checked