Back to Multiple platform build/check report for BioC 3.10 |
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This page was generated on 2020-04-15 12:28:48 -0400 (Wed, 15 Apr 2020).
Package 160/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
BiocSklearn 1.8.1 VJ Carey
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
Package: BiocSklearn |
Version: 1.8.1 |
Command: chmod a+r BiocSklearn -R && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data BiocSklearn |
StartedAt: 2020-04-14 23:45:29 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 23:47:49 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 139.9 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r BiocSklearn -R && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe --arch x64 CMD build --keep-empty-dirs --no-resave-data BiocSklearn ### ############################################################################## ############################################################################## * checking for file 'BiocSklearn/DESCRIPTION' ... OK * preparing 'BiocSklearn': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'BiocSklearn.Rmd' using rmarkdown Quitting from lines 170-173 (BiocSklearn.Rmd) Error: processing vignette 'BiocSklearn.Rmd' failed with diagnostics: RuntimeError: Evaluation error: Expecting a single string value: [type=environment; extent=2].. Detailed traceback: File "<string>", line 1, in <module> File "C:\Python27\lib\site-packages\h5py\_hl\files.py", line 408, in __init__ swmr=swmr) File "C:\Python27\lib\site-packages\h5py\_hl\files.py", line 194, in make_fid "See the docs for details.", H5pyDeprecationWarning, stacklevel=3) File "C:/Python27\lib\warnings.py", line 33, in _show_warning file.write(formatwarning(message, category, filename, lineno, line)) File "C:/Users/biocbuild/bbs-3.10-bioc/R/library/reticulate/python\rpytools\output.py", line 105, in write return self.handler(message) File "C:/Users/biocbuild/bbs-3.10-bioc/R/library/reticulate/python\rpytools\call.py", line 21, in python_function raise RuntimeError(res[kErrorKey]) --- failed re-building 'BiocSklearn.Rmd' SUMMARY: processing the following file failed: 'BiocSklearn.Rmd' Error: Vignette re-building failed. Execution halted