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BioC 3.1: BUILD report for specL on petty

This page was generated on 2015-10-09 09:37:06 -0700 (Fri, 09 Oct 2015).

Package 930/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
specL 1.2.0
Christian Panse
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/specL
Last Changed Rev: 102591 / Revision: 109384
Last Changed Date: 2015-04-16 12:42:01 -0700 (Thu, 16 Apr 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded [ ERROR ] skipped  skipped 
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: specL
Version: 1.2.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data specL
StartedAt: 2015-10-08 20:53:47 -0700 (Thu, 08 Oct 2015)
EndedAt: 2015-10-08 20:53:49 -0700 (Thu, 08 Oct 2015)
EllapsedTime: 2.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data specL
###
##############################################################################
##############################################################################


* checking for file ‘specL/DESCRIPTION’ ... OK
* preparing ‘specL’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘specL’ ...
** libs
I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.2/Resources/library/Rcpp/include"      -c lower_bound.cpp -o lower_bound.o
/bin/sh: I/Library/Frameworks/R.framework/Resources/include: No such file or directory
make: [lower_bound.o] Error 127 (ignored)
-dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -L/usr/local/lib -o specL.so lower_bound.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
/bin/sh: -dynamiclib: command not found
make: *** [specL.so] Error 127
ERROR: compilation failed for package ‘specL’
* removing ‘/private/tmp/RtmpHVSIK4/Rinst102bd384ca1b5/specL’
      -----------------------------------
ERROR: package installation failed