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BioC 3.1: BUILD report for msa on moscato2

This page was generated on 2015-10-09 09:32:21 -0700 (Fri, 09 Oct 2015).

Package 628/1024HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
msa 1.0.2
Ulrich Bodenhofer
Snapshot Date: 2015-10-08 17:20:21 -0700 (Thu, 08 Oct 2015)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_1/madman/Rpacks/msa
Last Changed Rev: 108926 / Revision: 109384
Last Changed Date: 2015-09-29 06:10:04 -0700 (Tue, 29 Sep 2015)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded [ OK ] OK  OK UNNEEDED, same version exists in internal repository
petty Mac OS X Snow Leopard (10.6.8) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
morelia Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: msa
Version: 1.0.2
Command: chmod a+r msa -R && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
StartedAt: 2015-10-08 22:57:03 -0700 (Thu, 08 Oct 2015)
EndedAt: 2015-10-08 23:03:24 -0700 (Thu, 08 Oct 2015)
EllapsedTime: 381.5 seconds
RetCode: 0
Status:  OK  
PackageFile: msa_1.0.2.tar.gz
PackageFileSize: 3.524 MiB

Command output

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###
### Running command:
###
###   chmod a+r msa -R && E:\biocbld\bbs-3.1-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data msa
###
##############################################################################
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* checking for file 'msa/DESCRIPTION' ... OK
* preparing 'msa':
* checking DESCRIPTION meta-information ... OK
* cleaning src
Warning: running command '"make" -f "E:/biocbld/bbs-3.1-bioc/R/share/make/clean.mk" -f Makevars.win clean' had status 2
* running 'cleanup.win'
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
Warning: running command '"make" -f "E:/biocbld/bbs-3.1-bioc/R/share/make/clean.mk" -f Makevars.win clean' had status 2
* running 'cleanup.win'
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'msa_1.0.2.tar.gz'
Warning: file 'msa/cleanup' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalOmega/configure' did not have execute permissions: corrected
Warning: file 'msa/src/ClustalW/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-7.2/configure' did not have execute permissions: corrected
Warning: file 'msa/src/gc-7.2/libatomic_ops/configure' did not have execute permissions: corrected