BioC 3.1: BUILD report for eisa on petty

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data eisa
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* checking for file ‘eisa/DESCRIPTION’ ... OK
* preparing ‘eisa’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Loading required package: MASS
Loading required package: grid
Loading required package: colorspace
Loading required package: lattice
Loading required package: isa2
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall,
    clusterEvalQ, clusterExport, clusterMap,
    parApply, parCapply, parLapply, parLapplyLB,
    parRapply, parSapply, parSapplyLB

The following object is masked from ‘package:stats’:

    xtabs

The following objects are masked from ‘package:base’:

    anyDuplicated, append, as.data.frame, as.vector,
    cbind, colnames, do.call, duplicated, eval,
    evalq, Filter, Find, get, intersect, is.unsorted,
    lapply, Map, mapply, match, mget, order, paste,
    pmax, pmax.int, pmin, pmin.int, Position, rank,
    rbind, Reduce, rep.int, rownames, sapply,
    setdiff, sort, table, tapply, union, unique,
    unlist, unsplit

Welcome to Bioconductor

    Vignettes contain introductory material; view
    with 'browseVignettes()'. To cite Bioconductor,
    see 'citation("Biobase")', and for packages
    'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: GenomeInfoDb
Loading required package: S4Vectors
Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’
Loading required package: IRanges

Attaching package: ‘AnnotationDbi’

The following object is masked from ‘package:MASS’:

    select

Loading required package: DBI

Loading required package: org.Hs.eg.db



KEGG.db contains mappings based on older data because
  the original resource was removed from the the
  public domain before the most recent update was
  produced. This package should now be considered
  deprecated and future versions of Bioconductor may
  not have it available.  Users who want more current
  data are encouraged to look at the KEGGREST or
  reactome.db packages


Attaching package: ‘igraph’

The following objects are masked from ‘package:IRanges’:

    compare, simplify, union

The following objects are masked from ‘package:S4Vectors’:

    compare, union

The following objects are masked from ‘package:BiocGenerics’:

    normalize, union

The following objects are masked from ‘package:stats’:

    decompose, spectrum

The following object is masked from ‘package:base’:

    union


Error: processing vignette 'EISA_biclust.Rnw' failed with diagnostics:
 chunk 16 (label = GOtreeplot-real) 
Error in summary(GO$CC)[[3]] : subscript out of bounds
Execution halted
BioC 3.1: BUILD report for eisa on petty

Summary

Command output
