Package: rtracklayer

Version: 1.13.5

Command: /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rtracklayer

StartedAt: 2011-06-21 23:28:44 -0700 (Tue, 21 Jun 2011)

EndedAt: 2011-06-21 23:30:03 -0700 (Tue, 21 Jun 2011)

EllapsedTime: 79.4 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file ‘rtracklayer/DESCRIPTION’ ... OK
* preparing ‘rtracklayer’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  ‘browseVignettes()’. To cite Bioconductor, see
  ‘citation("Biobase")’ and for packages ‘citation("pkgname")’.

Loading required package: hgu133plus2.db
Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI


Loading required package: RCurl
Loading required package: bitops
Loading required package: IRanges

Attaching package: ‘IRanges’

The following object(s) are masked from ‘package:Biobase’:

    updateObject

The following object(s) are masked from ‘package:base’:

    Map, cbind, eval, intersect, mapply, order, paste, pmax,
    pmax.int, pmin, pmin.int, rbind, rep.int, setdiff, table,
    union

Loading required package: BSgenome
Loading required package: Biostrings

Error: processing vignette ‘rtracklayer.Rnw’ failed with diagnostics:
 chunk 40 (label = track-nrsf) 
Error in RangedData(ranges) : 
  ‘ranges’ must be a Ranges or directly coercible to RangedData
Execution halted